Applications of Membrane Computing in Systems and Synthetic Biology

Applications of Membrane Computing in Systems and Synthetic Biology

Author: Pierluigi Frisco

Publisher: Springer Science & Business Media

Published: 2013-12-17

Total Pages: 277

ISBN-13: 3319031910

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Membrane Computing was introduced as a computational paradigm in Natural Computing. The models introduced, called Membrane (or P) Systems, provide a coherent platform to describe and study living cells as computational systems. Membrane Systems have been investigated for their computational aspects and employed to model problems in other fields, like: Computer Science, Linguistics, Biology, Economy, Computer Graphics, Robotics, etc. Their inherent parallelism, heterogeneity and intrinsic versatility allow them to model a broad range of processes and phenomena, being also an efficient means to solve and analyze problems in a novel way. Membrane Computing has been used to model biological systems, becoming with time a thorough modeling paradigm comparable, in its modeling and predicting capabilities, to more established models in this area. This book is the result of the need to collect, in an organic way, different facets of this paradigm. The chapters of this book, together with the web pages accompanying them, present different applications of Membrane Systems to Biology. Deterministic, non-deterministic and stochastic systems paired with different algorithms and methodologies show the full potential of this framework. The book is addressed to researchers interested in applications of discrete biological models and the interplay between Membrane Systems and other approaches to analyze complex systems.


Book Synopsis Applications of Membrane Computing in Systems and Synthetic Biology by : Pierluigi Frisco

Download or read book Applications of Membrane Computing in Systems and Synthetic Biology written by Pierluigi Frisco and published by Springer Science & Business Media. This book was released on 2013-12-17 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: Membrane Computing was introduced as a computational paradigm in Natural Computing. The models introduced, called Membrane (or P) Systems, provide a coherent platform to describe and study living cells as computational systems. Membrane Systems have been investigated for their computational aspects and employed to model problems in other fields, like: Computer Science, Linguistics, Biology, Economy, Computer Graphics, Robotics, etc. Their inherent parallelism, heterogeneity and intrinsic versatility allow them to model a broad range of processes and phenomena, being also an efficient means to solve and analyze problems in a novel way. Membrane Computing has been used to model biological systems, becoming with time a thorough modeling paradigm comparable, in its modeling and predicting capabilities, to more established models in this area. This book is the result of the need to collect, in an organic way, different facets of this paradigm. The chapters of this book, together with the web pages accompanying them, present different applications of Membrane Systems to Biology. Deterministic, non-deterministic and stochastic systems paired with different algorithms and methodologies show the full potential of this framework. The book is addressed to researchers interested in applications of discrete biological models and the interplay between Membrane Systems and other approaches to analyze complex systems.

Membrane Computing Models: Implementations

Membrane Computing Models: Implementations

Author: Gexiang Zhang

Publisher: Springer Nature

Published: 2021-07-01

Total Pages: 292

ISBN-13: 9811615667

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The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models.


Book Synopsis Membrane Computing Models: Implementations by : Gexiang Zhang

Download or read book Membrane Computing Models: Implementations written by Gexiang Zhang and published by Springer Nature. This book was released on 2021-07-01 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models.

Real-life Applications with Membrane Computing

Real-life Applications with Membrane Computing

Author: Gexiang Zhang

Publisher: Springer

Published: 2017-04-05

Total Pages: 365

ISBN-13: 3319559893

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This book thoroughly investigates the underlying theoretical basis of membrane computing models, and reveals their latest applications. In addition, to date there have been no illustrative case studies or complex real-life applications that capitalize on the full potential of the sophisticated membrane systems computational apparatus; gaps that this book remedies. By studying various complex applications – including engineering optimization, power systems fault diagnosis, mobile robot controller design, and complex biological systems involving data modeling and process interactions – the book also extends the capabilities of membrane systems models with features such as formal verification techniques, evolutionary approaches, and fuzzy reasoning methods. As such, the book offers a comprehensive and up-to-date guide for all researchers, PhDs and undergraduate students in the fields of computer science, engineering and the bio-sciences who are interested in the applications of natural computing models.


Book Synopsis Real-life Applications with Membrane Computing by : Gexiang Zhang

Download or read book Real-life Applications with Membrane Computing written by Gexiang Zhang and published by Springer. This book was released on 2017-04-05 with total page 365 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book thoroughly investigates the underlying theoretical basis of membrane computing models, and reveals their latest applications. In addition, to date there have been no illustrative case studies or complex real-life applications that capitalize on the full potential of the sophisticated membrane systems computational apparatus; gaps that this book remedies. By studying various complex applications – including engineering optimization, power systems fault diagnosis, mobile robot controller design, and complex biological systems involving data modeling and process interactions – the book also extends the capabilities of membrane systems models with features such as formal verification techniques, evolutionary approaches, and fuzzy reasoning methods. As such, the book offers a comprehensive and up-to-date guide for all researchers, PhDs and undergraduate students in the fields of computer science, engineering and the bio-sciences who are interested in the applications of natural computing models.

Membrane Computing Models: Implementations

Membrane Computing Models: Implementations

Author: Gexiang Zhang

Publisher:

Published: 2021

Total Pages: 0

ISBN-13: 9789811615672

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The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models. .


Book Synopsis Membrane Computing Models: Implementations by : Gexiang Zhang

Download or read book Membrane Computing Models: Implementations written by Gexiang Zhang and published by . This book was released on 2021 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models. .

Membrane Computing

Membrane Computing

Author: Marian Gheorghe

Publisher: Springer

Published: 2014-12-16

Total Pages: 413

ISBN-13: 3319143700

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This book constitutes the thoroughly refereed post-conference proceedings of the 15th International Conference on Membrane Computing, CMC 2014, held in Prague, Czech Republic, in August 2014. The 19 revised selected papers presented together with 5 invited lectures were carefully reviewed and selected from 24 papers presented at the conference. In addition, two papers selected from the 22 papers presented at the regional version of CMC, the Asian Conference on Membrane Computing , ACMC 2014, held in Coimbatore, India, are included. The papers cover a wide range of topics in the area of membrane computing, which is an area of computer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures.


Book Synopsis Membrane Computing by : Marian Gheorghe

Download or read book Membrane Computing written by Marian Gheorghe and published by Springer. This book was released on 2014-12-16 with total page 413 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed post-conference proceedings of the 15th International Conference on Membrane Computing, CMC 2014, held in Prague, Czech Republic, in August 2014. The 19 revised selected papers presented together with 5 invited lectures were carefully reviewed and selected from 24 papers presented at the conference. In addition, two papers selected from the 22 papers presented at the regional version of CMC, the Asian Conference on Membrane Computing , ACMC 2014, held in Coimbatore, India, are included. The papers cover a wide range of topics in the area of membrane computing, which is an area of computer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures.

Membrane Computing

Membrane Computing

Author: Marian Gheorghe

Publisher: Springer Science & Business Media

Published: 2012-01-12

Total Pages: 379

ISBN-13: 3642280234

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This book constitutes the thoroughly refereed post-conference proceedings of the 12th International Conference on Membrane Computing, CMC 2011, held in Fontainebleau, France, in August 2011. The 19 revised selected papers presented were carefully reviewed and selected from 27 papers and 5 posters presented at the conference. The book also contains full papers or extended abstracts of the 5 invited presentations. The papers address all the main directions of research in membrane computing, ranging from theoretical topics in the mathematics and computer science to application issues.


Book Synopsis Membrane Computing by : Marian Gheorghe

Download or read book Membrane Computing written by Marian Gheorghe and published by Springer Science & Business Media. This book was released on 2012-01-12 with total page 379 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed post-conference proceedings of the 12th International Conference on Membrane Computing, CMC 2011, held in Fontainebleau, France, in August 2011. The 19 revised selected papers presented were carefully reviewed and selected from 27 papers and 5 posters presented at the conference. The book also contains full papers or extended abstracts of the 5 invited presentations. The papers address all the main directions of research in membrane computing, ranging from theoretical topics in the mathematics and computer science to application issues.

Advances in Unconventional Computing

Advances in Unconventional Computing

Author: Andrew Adamatzky

Publisher: Springer

Published: 2016-07-18

Total Pages: 868

ISBN-13: 3319339249

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The unconventional computing is a niche for interdisciplinary science, cross-bred of computer science, physics, mathematics, chemistry, electronic engineering, biology, material science and nanotechnology. The aims of this book are to uncover and exploit principles and mechanisms of information processing in and functional properties of physical, chemical and living systems to develop efficient algorithms, design optimal architectures and manufacture working prototypes of future and emergent computing devices. This first volume presents theoretical foundations of the future and emergent computing paradigms and architectures. The topics covered are computability, (non-)universality and complexity of computation; physics of computation, analog and quantum computing; reversible and asynchronous devices; cellular automata and other mathematical machines; P-systems and cellular computing; infinity and spatial computation; chemical and reservoir computing. The book is the encyclopedia, the first ever complete authoritative account, of the theoretical and experimental findings in the unconventional computing written by the world leaders in the field. All chapters are self-contains, no specialist background is required to appreciate ideas, findings, constructs and designs presented. This treatise in unconventional computing appeals to readers from all walks of life, from high-school pupils to university professors, from mathematicians, computers scientists and engineers to chemists and biologists.


Book Synopsis Advances in Unconventional Computing by : Andrew Adamatzky

Download or read book Advances in Unconventional Computing written by Andrew Adamatzky and published by Springer. This book was released on 2016-07-18 with total page 868 pages. Available in PDF, EPUB and Kindle. Book excerpt: The unconventional computing is a niche for interdisciplinary science, cross-bred of computer science, physics, mathematics, chemistry, electronic engineering, biology, material science and nanotechnology. The aims of this book are to uncover and exploit principles and mechanisms of information processing in and functional properties of physical, chemical and living systems to develop efficient algorithms, design optimal architectures and manufacture working prototypes of future and emergent computing devices. This first volume presents theoretical foundations of the future and emergent computing paradigms and architectures. The topics covered are computability, (non-)universality and complexity of computation; physics of computation, analog and quantum computing; reversible and asynchronous devices; cellular automata and other mathematical machines; P-systems and cellular computing; infinity and spatial computation; chemical and reservoir computing. The book is the encyclopedia, the first ever complete authoritative account, of the theoretical and experimental findings in the unconventional computing written by the world leaders in the field. All chapters are self-contains, no specialist background is required to appreciate ideas, findings, constructs and designs presented. This treatise in unconventional computing appeals to readers from all walks of life, from high-school pupils to university professors, from mathematicians, computers scientists and engineers to chemists and biologists.

Membrane Computing

Membrane Computing

Author: Grzegorz Rozenberg

Publisher: Springer

Published: 2015-12-29

Total Pages: 395

ISBN-13: 3319284754

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This book constitutes revised selected papers from the International Conference on Membrane Computing, CMC 2015, held in Valencia, Spain, in August 2015. The 22 full papers presented in this volume were carefully reviewed and selected from 34 submissions. The volume also contains 3 invited talks in full-paper length.


Book Synopsis Membrane Computing by : Grzegorz Rozenberg

Download or read book Membrane Computing written by Grzegorz Rozenberg and published by Springer. This book was released on 2015-12-29 with total page 395 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes revised selected papers from the International Conference on Membrane Computing, CMC 2015, held in Valencia, Spain, in August 2015. The 22 full papers presented in this volume were carefully reviewed and selected from 34 submissions. The volume also contains 3 invited talks in full-paper length.

Membrane Computing

Membrane Computing

Author: Alberto Leporati

Publisher: Springer

Published: 2017-02-21

Total Pages: 372

ISBN-13: 3319540726

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This book contains revised selected papers from the 17th International Conference on Membrane Computing, CMC 2017, held in Milan, Italy, in July 2016. The 19 full papers presented in this volume were carefully reviewed and selected from 28 submissions. They deal with membrane computing (P systems theory), an area of copmputer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures. The volume also contains 3 invited talks in full-paper length.


Book Synopsis Membrane Computing by : Alberto Leporati

Download or read book Membrane Computing written by Alberto Leporati and published by Springer. This book was released on 2017-02-21 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book contains revised selected papers from the 17th International Conference on Membrane Computing, CMC 2017, held in Milan, Italy, in July 2016. The 19 full papers presented in this volume were carefully reviewed and selected from 28 submissions. They deal with membrane computing (P systems theory), an area of copmputer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures. The volume also contains 3 invited talks in full-paper length.

Bio-inspired Computing – Theories and Applications

Bio-inspired Computing – Theories and Applications

Author: Maoguo Gong

Publisher: Springer

Published: 2017-01-07

Total Pages: 541

ISBN-13: 981103611X

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The two-volume set, CCIS 681 and CCIS 682, constitutes the proceedings of the 11th International Conference on Bio-Inspired Computing: Theories and Applications, BIC-TA 2016, held in Xi'an, China, in October 2016.The 115 revised full papers presented were carefully reviewed and selected from 343 submissions. The papers of Part I are organized in topical sections on DNA Computing; Membrane Computing; Neural Computing; Machine Learning. The papers of Part II are organized in topical sections on Evolutionary Computing; Multi-objective Optimization; Pattern Recognition; Others.


Book Synopsis Bio-inspired Computing – Theories and Applications by : Maoguo Gong

Download or read book Bio-inspired Computing – Theories and Applications written by Maoguo Gong and published by Springer. This book was released on 2017-01-07 with total page 541 pages. Available in PDF, EPUB and Kindle. Book excerpt: The two-volume set, CCIS 681 and CCIS 682, constitutes the proceedings of the 11th International Conference on Bio-Inspired Computing: Theories and Applications, BIC-TA 2016, held in Xi'an, China, in October 2016.The 115 revised full papers presented were carefully reviewed and selected from 343 submissions. The papers of Part I are organized in topical sections on DNA Computing; Membrane Computing; Neural Computing; Machine Learning. The papers of Part II are organized in topical sections on Evolutionary Computing; Multi-objective Optimization; Pattern Recognition; Others.