Beginner's guide to spatial, temporal,and spatial-temporal ecological data analysis with R-INLA

Beginner's guide to spatial, temporal,and spatial-temporal ecological data analysis with R-INLA

Author: Alain F. Zuur

Publisher:

Published: 2017

Total Pages: 362

ISBN-13: 9780957174191

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Book Synopsis Beginner's guide to spatial, temporal,and spatial-temporal ecological data analysis with R-INLA by : Alain F. Zuur

Download or read book Beginner's guide to spatial, temporal,and spatial-temporal ecological data analysis with R-INLA written by Alain F. Zuur and published by . This book was released on 2017 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt:


Applied Spatial Data Analysis with R

Applied Spatial Data Analysis with R

Author: Roger S. Bivand

Publisher: Springer Science & Business Media

Published: 2013-06-21

Total Pages: 414

ISBN-13: 1461476186

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Applied Spatial Data Analysis with R, second edition, is divided into two basic parts, the first presenting R packages, functions, classes and methods for handling spatial data. This part is of interest to users who need to access and visualise spatial data. Data import and export for many file formats for spatial data are covered in detail, as is the interface between R and the open source GRASS GIS and the handling of spatio-temporal data. The second part showcases more specialised kinds of spatial data analysis, including spatial point pattern analysis, interpolation and geostatistics, areal data analysis and disease mapping. The coverage of methods of spatial data analysis ranges from standard techniques to new developments, and the examples used are largely taken from the spatial statistics literature. All the examples can be run using R contributed packages available from the CRAN website, with code and additional data sets from the book's own website. Compared to the first edition, the second edition covers the more systematic approach towards handling spatial data in R, as well as a number of important and widely used CRAN packages that have appeared since the first edition. This book will be of interest to researchers who intend to use R to handle, visualise, and analyse spatial data. It will also be of interest to spatial data analysts who do not use R, but who are interested in practical aspects of implementing software for spatial data analysis. It is a suitable companion book for introductory spatial statistics courses and for applied methods courses in a wide range of subjects using spatial data, including human and physical geography, geographical information science and geoinformatics, the environmental sciences, ecology, public health and disease control, economics, public administration and political science. The book has a website where complete code examples, data sets, and other support material may be found: http://www.asdar-book.org. The authors have taken part in writing and maintaining software for spatial data handling and analysis with R in concert since 2003.


Book Synopsis Applied Spatial Data Analysis with R by : Roger S. Bivand

Download or read book Applied Spatial Data Analysis with R written by Roger S. Bivand and published by Springer Science & Business Media. This book was released on 2013-06-21 with total page 414 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied Spatial Data Analysis with R, second edition, is divided into two basic parts, the first presenting R packages, functions, classes and methods for handling spatial data. This part is of interest to users who need to access and visualise spatial data. Data import and export for many file formats for spatial data are covered in detail, as is the interface between R and the open source GRASS GIS and the handling of spatio-temporal data. The second part showcases more specialised kinds of spatial data analysis, including spatial point pattern analysis, interpolation and geostatistics, areal data analysis and disease mapping. The coverage of methods of spatial data analysis ranges from standard techniques to new developments, and the examples used are largely taken from the spatial statistics literature. All the examples can be run using R contributed packages available from the CRAN website, with code and additional data sets from the book's own website. Compared to the first edition, the second edition covers the more systematic approach towards handling spatial data in R, as well as a number of important and widely used CRAN packages that have appeared since the first edition. This book will be of interest to researchers who intend to use R to handle, visualise, and analyse spatial data. It will also be of interest to spatial data analysts who do not use R, but who are interested in practical aspects of implementing software for spatial data analysis. It is a suitable companion book for introductory spatial statistics courses and for applied methods courses in a wide range of subjects using spatial data, including human and physical geography, geographical information science and geoinformatics, the environmental sciences, ecology, public health and disease control, economics, public administration and political science. The book has a website where complete code examples, data sets, and other support material may be found: http://www.asdar-book.org. The authors have taken part in writing and maintaining software for spatial data handling and analysis with R in concert since 2003.


Spatial Data Analysis in Ecology and Agriculture Using R

Spatial Data Analysis in Ecology and Agriculture Using R

Author: Richard E. Plant

Publisher: CRC Press

Published: 2012-03-07

Total Pages: 637

ISBN-13: 1439819149

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Assuming no prior knowledge of R, Spatial Data Analysis in Ecology and Agriculture Using R provides practical instruction on the use of the R programming language to analyze spatial data arising from research in ecology and agriculture. Written in terms of four data sets easily accessible online, this book guides the reader through the analysis of each data set, including setting research objectives, designing the sampling plan, data quality control, exploratory and confirmatory data analysis, and drawing scientific conclusions. Based on the author’s spatial data analysis course at the University of California, Davis, the book is intended for classroom use or self-study by graduate students and researchers in ecology, geography, and agricultural science with an interest in the analysis of spatial data.


Book Synopsis Spatial Data Analysis in Ecology and Agriculture Using R by : Richard E. Plant

Download or read book Spatial Data Analysis in Ecology and Agriculture Using R written by Richard E. Plant and published by CRC Press. This book was released on 2012-03-07 with total page 637 pages. Available in PDF, EPUB and Kindle. Book excerpt: Assuming no prior knowledge of R, Spatial Data Analysis in Ecology and Agriculture Using R provides practical instruction on the use of the R programming language to analyze spatial data arising from research in ecology and agriculture. Written in terms of four data sets easily accessible online, this book guides the reader through the analysis of each data set, including setting research objectives, designing the sampling plan, data quality control, exploratory and confirmatory data analysis, and drawing scientific conclusions. Based on the author’s spatial data analysis course at the University of California, Davis, the book is intended for classroom use or self-study by graduate students and researchers in ecology, geography, and agricultural science with an interest in the analysis of spatial data.


Spatial and Spatio-temporal Bayesian Models with R - INLA

Spatial and Spatio-temporal Bayesian Models with R - INLA

Author: Marta Blangiardo

Publisher: John Wiley & Sons

Published: 2015-06-02

Total Pages: 322

ISBN-13: 1118326555

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Spatial and Spatio-Temporal Bayesian Models with R-INLA provides a much needed, practically oriented & innovative presentation of the combination of Bayesian methodology and spatial statistics. The authors combine an introduction to Bayesian theory and methodology with a focus on the spatial and spatio-temporal models used within the Bayesian framework and a series of practical examples which allow the reader to link the statistical theory presented to real data problems. The numerous examples from the fields of epidemiology, biostatistics and social science all are coded in the R package R-INLA, which has proven to be a valid alternative to the commonly used Markov Chain Monte Carlo simulations


Book Synopsis Spatial and Spatio-temporal Bayesian Models with R - INLA by : Marta Blangiardo

Download or read book Spatial and Spatio-temporal Bayesian Models with R - INLA written by Marta Blangiardo and published by John Wiley & Sons. This book was released on 2015-06-02 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: Spatial and Spatio-Temporal Bayesian Models with R-INLA provides a much needed, practically oriented & innovative presentation of the combination of Bayesian methodology and spatial statistics. The authors combine an introduction to Bayesian theory and methodology with a focus on the spatial and spatio-temporal models used within the Bayesian framework and a series of practical examples which allow the reader to link the statistical theory presented to real data problems. The numerous examples from the fields of epidemiology, biostatistics and social science all are coded in the R package R-INLA, which has proven to be a valid alternative to the commonly used Markov Chain Monte Carlo simulations


Spatial Analysis

Spatial Analysis

Author: Mark R. T. Dale

Publisher: Cambridge University Press

Published: 2014-09-11

Total Pages: 453

ISBN-13: 0521143500

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An essential guide for graduates, researchers and professionals to spatial analysis and the fast-growing range of methods available.


Book Synopsis Spatial Analysis by : Mark R. T. Dale

Download or read book Spatial Analysis written by Mark R. T. Dale and published by Cambridge University Press. This book was released on 2014-09-11 with total page 453 pages. Available in PDF, EPUB and Kindle. Book excerpt: An essential guide for graduates, researchers and professionals to spatial analysis and the fast-growing range of methods available.


A Beginner's Guide to GLM and GLMM with R

A Beginner's Guide to GLM and GLMM with R

Author: Alain F. Zuur

Publisher:

Published: 2013

Total Pages: 256

ISBN-13: 9780957174139

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This book presents Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) based on both frequency-based and Bayesian concepts.


Book Synopsis A Beginner's Guide to GLM and GLMM with R by : Alain F. Zuur

Download or read book A Beginner's Guide to GLM and GLMM with R written by Alain F. Zuur and published by . This book was released on 2013 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) based on both frequency-based and Bayesian concepts.


Beginner's Guide to Zero-inflated Models with R

Beginner's Guide to Zero-inflated Models with R

Author: Alain F. Zuur

Publisher:

Published: 2016

Total Pages: 414

ISBN-13: 9780957174184

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Book Synopsis Beginner's Guide to Zero-inflated Models with R by : Alain F. Zuur

Download or read book Beginner's Guide to Zero-inflated Models with R written by Alain F. Zuur and published by . This book was released on 2016 with total page 414 pages. Available in PDF, EPUB and Kindle. Book excerpt:


Spatial Statistics for Data Science

Spatial Statistics for Data Science

Author: Paula Moraga

Publisher: CRC Press

Published: 2023-12-08

Total Pages: 332

ISBN-13: 1003832334

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Spatial data is crucial to improve decision-making in a wide range of fields including environment, health, ecology, urban planning, economy, and society. Spatial Statistics for Data Science: Theory and Practice with R describes statistical methods, modeling approaches, and visualization techniques to analyze spatial data using R. The book provides a comprehensive overview of the varying types of spatial data, and detailed explanations of the theoretical concepts of spatial statistics, alongside fully reproducible examples which demonstrate how to simulate, describe, and analyze spatial data in various applications. Combining theory and practice, the book includes real-world data science examples such as disease risk mapping, air pollution prediction, species distribution modeling, crime mapping, and real state analyses. The book utilizes publicly available data and offers clear explanations of the R code for importing, manipulating, analyzing, and visualizing data, as well as the interpretation of the results. This ensures contents are easily accessible and fully reproducible for students, researchers, and practitioners. Key Features: Describes R packages for retrieval, manipulation, and visualization of spatial data Offers a comprehensive overview of spatial statistical methods including spatial autocorrelation, clustering, spatial interpolation, model-based geostatistics, and spatial point processes Provides detailed explanations on how to fit and interpret Bayesian spatial models using the integrated nested Laplace approximation (INLA) and stochastic partial differential equation (SPDE) approaches


Book Synopsis Spatial Statistics for Data Science by : Paula Moraga

Download or read book Spatial Statistics for Data Science written by Paula Moraga and published by CRC Press. This book was released on 2023-12-08 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: Spatial data is crucial to improve decision-making in a wide range of fields including environment, health, ecology, urban planning, economy, and society. Spatial Statistics for Data Science: Theory and Practice with R describes statistical methods, modeling approaches, and visualization techniques to analyze spatial data using R. The book provides a comprehensive overview of the varying types of spatial data, and detailed explanations of the theoretical concepts of spatial statistics, alongside fully reproducible examples which demonstrate how to simulate, describe, and analyze spatial data in various applications. Combining theory and practice, the book includes real-world data science examples such as disease risk mapping, air pollution prediction, species distribution modeling, crime mapping, and real state analyses. The book utilizes publicly available data and offers clear explanations of the R code for importing, manipulating, analyzing, and visualizing data, as well as the interpretation of the results. This ensures contents are easily accessible and fully reproducible for students, researchers, and practitioners. Key Features: Describes R packages for retrieval, manipulation, and visualization of spatial data Offers a comprehensive overview of spatial statistical methods including spatial autocorrelation, clustering, spatial interpolation, model-based geostatistics, and spatial point processes Provides detailed explanations on how to fit and interpret Bayesian spatial models using the integrated nested Laplace approximation (INLA) and stochastic partial differential equation (SPDE) approaches


Applied Spatial Data Analysis with R (2008).

Applied Spatial Data Analysis with R (2008).

Author:

Publisher:

Published:

Total Pages:

ISBN-13:

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Book Synopsis Applied Spatial Data Analysis with R (2008). by :

Download or read book Applied Spatial Data Analysis with R (2008). written by and published by . This book was released on with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:


Bayesian Modeling of Spatio-Temporal Data with R

Bayesian Modeling of Spatio-Temporal Data with R

Author: Sujit Sahu

Publisher: CRC Press

Published: 2022-02-23

Total Pages: 385

ISBN-13: 1000543692

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Applied sciences, both physical and social, such as atmospheric, biological, climate, demographic, economic, ecological, environmental, oceanic and political, routinely gather large volumes of spatial and spatio-temporal data in order to make wide ranging inference and prediction. Ideally such inferential tasks should be approached through modelling, which aids in estimation of uncertainties in all conclusions drawn from such data. Unified Bayesian modelling, implemented through user friendly software packages, provides a crucial key to unlocking the full power of these methods for solving challenging practical problems. Key features of the book: • Accessible detailed discussion of a majority of all aspects of Bayesian methods and computations with worked examples, numerical illustrations and exercises • A spatial statistics jargon buster chapter that enables the reader to build up a vocabulary without getting clouded in modeling and technicalities • Computation and modeling illustrations are provided with the help of the dedicated R package bmstdr, allowing the reader to use well-known packages and platforms, such as rstan, INLA, spBayes, spTimer, spTDyn, CARBayes, CARBayesST, etc • Included are R code notes detailing the algorithms used to produce all the tables and figures, with data and code available via an online supplement • Two dedicated chapters discuss practical examples of spatio-temporal modeling of point referenced and areal unit data • Throughout, the emphasis has been on validating models by splitting data into test and training sets following on the philosophy of machine learning and data science This book is designed to make spatio-temporal modeling and analysis accessible and understandable to a wide audience of students and researchers, from mathematicians and statisticians to practitioners in the applied sciences. It presents most of the modeling with the help of R commands written in a purposefully developed R package to facilitate spatio-temporal modeling. It does not compromise on rigour, as it presents the underlying theories of Bayesian inference and computation in standalone chapters, which would be appeal those interested in the theoretical details. By avoiding hard core mathematics and calculus, this book aims to be a bridge that removes the statistical knowledge gap from among the applied scientists.


Book Synopsis Bayesian Modeling of Spatio-Temporal Data with R by : Sujit Sahu

Download or read book Bayesian Modeling of Spatio-Temporal Data with R written by Sujit Sahu and published by CRC Press. This book was released on 2022-02-23 with total page 385 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied sciences, both physical and social, such as atmospheric, biological, climate, demographic, economic, ecological, environmental, oceanic and political, routinely gather large volumes of spatial and spatio-temporal data in order to make wide ranging inference and prediction. Ideally such inferential tasks should be approached through modelling, which aids in estimation of uncertainties in all conclusions drawn from such data. Unified Bayesian modelling, implemented through user friendly software packages, provides a crucial key to unlocking the full power of these methods for solving challenging practical problems. Key features of the book: • Accessible detailed discussion of a majority of all aspects of Bayesian methods and computations with worked examples, numerical illustrations and exercises • A spatial statistics jargon buster chapter that enables the reader to build up a vocabulary without getting clouded in modeling and technicalities • Computation and modeling illustrations are provided with the help of the dedicated R package bmstdr, allowing the reader to use well-known packages and platforms, such as rstan, INLA, spBayes, spTimer, spTDyn, CARBayes, CARBayesST, etc • Included are R code notes detailing the algorithms used to produce all the tables and figures, with data and code available via an online supplement • Two dedicated chapters discuss practical examples of spatio-temporal modeling of point referenced and areal unit data • Throughout, the emphasis has been on validating models by splitting data into test and training sets following on the philosophy of machine learning and data science This book is designed to make spatio-temporal modeling and analysis accessible and understandable to a wide audience of students and researchers, from mathematicians and statisticians to practitioners in the applied sciences. It presents most of the modeling with the help of R commands written in a purposefully developed R package to facilitate spatio-temporal modeling. It does not compromise on rigour, as it presents the underlying theories of Bayesian inference and computation in standalone chapters, which would be appeal those interested in the theoretical details. By avoiding hard core mathematics and calculus, this book aims to be a bridge that removes the statistical knowledge gap from among the applied scientists.