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Eco-Stats: Data Analysis in Ecology

Author: David I Warton

Publisher: Springer Nature

Published: 2022-08-10

Total Pages: 434

ISBN-13: 3030884430

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This book introduces ecologists to the wonderful world of modern tools for data analysis, especially multivariate analysis. For biologists with relatively little prior knowledge of statistics, it introduces a modern, advanced approach to data analysis in an intuitive and accessible way. The book begins by reviewing some core principles in statistics, and relates common methods to the linear model, a general framework for modeling data where the response is continuous. This is then extended to discrete data using generalized linear models, to designs with multiple sampling levels via mixed models, and to situations where there are multiple response variables via model-based approaches to multivariate analysis. Along the way there is an introduction to: important principles in model selection; adaptations of the model to handle non-linearity and cyclical variables; dependence due to structured correlation in time, space or phylogeny; and design-based techniques for inference that can relax some of the modelling assumptions. It concludes with a range of advanced topics in model-based multivariate analysis relevant to the modern ecologist, including fourth corner, latent variable and copula models. Examples span a variety of applications including environmental monitoring, species distribution modeling, global-scale surveys of plant traits, and small field experiments on biological controls. Math Boxes throughout the book explain some of the core ideas mathematically for readers who want to delve deeper, and R code is used throughout. Accompanying code, data, and solutions to exercises can be found in the ecostats R package on CRAN.

Book Synopsis Eco-Stats: Data Analysis in Ecology by : David I Warton

Download or read book Eco-Stats: Data Analysis in Ecology written by David I Warton and published by Springer Nature. This book was released on 2022-08-10 with total page 434 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces ecologists to the wonderful world of modern tools for data analysis, especially multivariate analysis. For biologists with relatively little prior knowledge of statistics, it introduces a modern, advanced approach to data analysis in an intuitive and accessible way. The book begins by reviewing some core principles in statistics, and relates common methods to the linear model, a general framework for modeling data where the response is continuous. This is then extended to discrete data using generalized linear models, to designs with multiple sampling levels via mixed models, and to situations where there are multiple response variables via model-based approaches to multivariate analysis. Along the way there is an introduction to: important principles in model selection; adaptations of the model to handle non-linearity and cyclical variables; dependence due to structured correlation in time, space or phylogeny; and design-based techniques for inference that can relax some of the modelling assumptions. It concludes with a range of advanced topics in model-based multivariate analysis relevant to the modern ecologist, including fourth corner, latent variable and copula models. Examples span a variety of applications including environmental monitoring, species distribution modeling, global-scale surveys of plant traits, and small field experiments on biological controls. Math Boxes throughout the book explain some of the core ideas mathematically for readers who want to delve deeper, and R code is used throughout. Accompanying code, data, and solutions to exercises can be found in the ecostats R package on CRAN.

Analyzing Ecological Data

Author: Alain Zuur

Publisher: Springer

Published: 2007-08-29

Total Pages: 686

ISBN-13: 0387459723

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This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.

Book Synopsis Analyzing Ecological Data by : Alain Zuur

Download or read book Analyzing Ecological Data written by Alain Zuur and published by Springer. This book was released on 2007-08-29 with total page 686 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.

Multivariate Analysis of Ecological Data

Author: Michael Greenacre

Publisher: Fundacion BBVA

Published: 2014-01-09

Total Pages: 336

ISBN-13: 8492937505

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La diversidad biológica es fruto de la interacción entre numerosas especies, ya sean marinas, vegetales o animales, a la par que de los muchos factores limitantes que caracterizan el medio que habitan. El análisis multivariante utiliza las relaciones entre diferentes variables para ordenar los objetos de estudio según sus propiedades colectivas y luego clasificarlos; es decir, agrupar especies o ecosistemas en distintas clases compuestas cada una por entidades con propiedades parecidas. El fin último es relacionar la variabilidad biológica observada con las correspondientes características medioambientales. Multivariate Analysis of Ecological Data explica de manera completa y estructurada cómo analizar e interpretar los datos ecológicos observados sobre múltiples variables, tanto biológicos como medioambientales. Tras una introducción general a los datos ecológicos multivariantes y la metodología estadística, se abordan en capítulos específicos, métodos como aglomeración (clustering), regresión, biplots, escalado multidimensional, análisis de correspondencias (simple y canónico) y análisis log-ratio, con atención también a sus problemas de modelado y aspectos inferenciales. El libro plantea una serie de aplicaciones a datos reales derivados de investigaciones ecológicas, además de dos casos detallados que llevan al lector a apreciar los retos de análisis, interpretación y comunicación inherentes a los estudios a gran escala y los diseños complejos.

Book Synopsis Multivariate Analysis of Ecological Data by : Michael Greenacre

Download or read book Multivariate Analysis of Ecological Data written by Michael Greenacre and published by Fundacion BBVA. This book was released on 2014-01-09 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: La diversidad biológica es fruto de la interacción entre numerosas especies, ya sean marinas, vegetales o animales, a la par que de los muchos factores limitantes que caracterizan el medio que habitan. El análisis multivariante utiliza las relaciones entre diferentes variables para ordenar los objetos de estudio según sus propiedades colectivas y luego clasificarlos; es decir, agrupar especies o ecosistemas en distintas clases compuestas cada una por entidades con propiedades parecidas. El fin último es relacionar la variabilidad biológica observada con las correspondientes características medioambientales. Multivariate Analysis of Ecological Data explica de manera completa y estructurada cómo analizar e interpretar los datos ecológicos observados sobre múltiples variables, tanto biológicos como medioambientales. Tras una introducción general a los datos ecológicos multivariantes y la metodología estadística, se abordan en capítulos específicos, métodos como aglomeración (clustering), regresión, biplots, escalado multidimensional, análisis de correspondencias (simple y canónico) y análisis log-ratio, con atención también a sus problemas de modelado y aspectos inferenciales. El libro plantea una serie de aplicaciones a datos reales derivados de investigaciones ecológicas, además de dos casos detallados que llevan al lector a apreciar los retos de análisis, interpretación y comunicación inherentes a los estudios a gran escala y los diseños complejos.

Ecological Statistics

Author: Gordon A. Fox

Publisher: Oxford University Press

Published: 2015

Total Pages: 407

ISBN-13: 0199672547

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An intermediate level text covering foundational ideas in statistics and their ecological application, including generalized linear and generalized mixed-effect models, as well as models allowing for mixtures, spatial or phylogenetic correlations, missing or censored data, and observational data; implemented in R and set within a contemporary research framework.

Book Synopsis Ecological Statistics by : Gordon A. Fox

Download or read book Ecological Statistics written by Gordon A. Fox and published by Oxford University Press. This book was released on 2015 with total page 407 pages. Available in PDF, EPUB and Kindle. Book excerpt: An intermediate level text covering foundational ideas in statistics and their ecological application, including generalized linear and generalized mixed-effect models, as well as models allowing for mixtures, spatial or phylogenetic correlations, missing or censored data, and observational data; implemented in R and set within a contemporary research framework.

Statistical Ecology

Author: John A. Ludwig

Publisher: John Wiley & Sons

Published: 1988-05-18

Total Pages: 362

ISBN-13: 9780471832355

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Ecological community data. Spatial pattern analysis. Species-abundance relations. Species affinity. Community classification. Community ordination. Community interpretation.

Book Synopsis Statistical Ecology by : John A. Ludwig

Download or read book Statistical Ecology written by John A. Ludwig and published by John Wiley & Sons. This book was released on 1988-05-18 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecological community data. Spatial pattern analysis. Species-abundance relations. Species affinity. Community classification. Community ordination. Community interpretation.

Ecological Models and Data in R

Author: Benjamin M. Bolker

Publisher: Princeton University Press

Published: 2008-07-21

Total Pages: 408

ISBN-13: 0691125228

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Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.

Book Synopsis Ecological Models and Data in R by : Benjamin M. Bolker

Download or read book Ecological Models and Data in R written by Benjamin M. Bolker and published by Princeton University Press. This book was released on 2008-07-21 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.

Environmental and Ecological Statistics with R, Second Edition

Author: Song S. Qian

Publisher: CRC Press

Published: 2016-11-03

Total Pages: 439

ISBN-13: 1498728758

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Emphasizing the inductive nature of statistical thinking, Environmental and Ecological Statistics with R, Second Edition, connects applied statistics to the environmental and ecological fields. Using examples from published works in the ecological and environmental literature, the book explains the approach to solving a statistical problem, covering model specification, parameter estimation, and model evaluation. It includes many examples to illustrate the statistical methods and presents R code for their implementation. The emphasis is on model interpretation and assessment, and using several core examples throughout the book, the author illustrates the iterative nature of statistical inference. The book starts with a description of commonly used statistical assumptions and exploratory data analysis tools for the verification of these assumptions. It then focuses on the process of building suitable statistical models, including linear and nonlinear models, classification and regression trees, generalized linear models, and multilevel models. It also discusses the use of simulation for model checking, and provides tools for a critical assessment of the developed models. The second edition also includes a complete critique of a threshold model. Environmental and Ecological Statistics with R, Second Edition focuses on statistical modeling and data analysis for environmental and ecological problems. By guiding readers through the process of scientific problem solving and statistical model development, it eases the transition from scientific hypothesis to statistical model.

Book Synopsis Environmental and Ecological Statistics with R, Second Edition by : Song S. Qian

Download or read book Environmental and Ecological Statistics with R, Second Edition written by Song S. Qian and published by CRC Press. This book was released on 2016-11-03 with total page 439 pages. Available in PDF, EPUB and Kindle. Book excerpt: Emphasizing the inductive nature of statistical thinking, Environmental and Ecological Statistics with R, Second Edition, connects applied statistics to the environmental and ecological fields. Using examples from published works in the ecological and environmental literature, the book explains the approach to solving a statistical problem, covering model specification, parameter estimation, and model evaluation. It includes many examples to illustrate the statistical methods and presents R code for their implementation. The emphasis is on model interpretation and assessment, and using several core examples throughout the book, the author illustrates the iterative nature of statistical inference. The book starts with a description of commonly used statistical assumptions and exploratory data analysis tools for the verification of these assumptions. It then focuses on the process of building suitable statistical models, including linear and nonlinear models, classification and regression trees, generalized linear models, and multilevel models. It also discusses the use of simulation for model checking, and provides tools for a critical assessment of the developed models. The second edition also includes a complete critique of a threshold model. Environmental and Ecological Statistics with R, Second Edition focuses on statistical modeling and data analysis for environmental and ecological problems. By guiding readers through the process of scientific problem solving and statistical model development, it eases the transition from scientific hypothesis to statistical model.

Statistical Ecology in Practice

Author: Stephen Waite

Publisher: Addison-Wesley Longman Limited

Published: 2000-01

Total Pages: 414

ISBN-13: 9780582236349

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This text combines principles of good field ecology research design with practical statistical analysis, suited to the needs of advanced students taking Field Ecology courses or undertaking projects that contribute to their final degree classification.

Book Synopsis Statistical Ecology in Practice by : Stephen Waite

Download or read book Statistical Ecology in Practice written by Stephen Waite and published by Addison-Wesley Longman Limited. This book was released on 2000-01 with total page 414 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text combines principles of good field ecology research design with practical statistical analysis, suited to the needs of advanced students taking Field Ecology courses or undertaking projects that contribute to their final degree classification.

Statistics for Ecologists Using R and Excel

Author: Mark Gardener

Publisher: Pelagic Publishing Ltd

Published: 2017-01-16

Total Pages: 503

ISBN-13: 1784271411

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This is a book about the scientific process and how you apply it to data in ecology. You will learn how to plan for data collection, how to assemble data, how to analyze data and finally how to present the results. The book uses Microsoft Excel and the powerful Open Source R program to carry out data handling as well as producing graphs. Statistical approaches covered include: data exploration; tests for difference – t-test and U-test; correlation – Spearman’s rank test and Pearson product-moment; association including Chi-squared tests and goodness of fit; multivariate testing using analysis of variance (ANOVA) and Kruskal–Wallis test; and multiple regression. Key skills taught in this book include: how to plan ecological projects; how to record and assemble your data; how to use R and Excel for data analysis and graphs; how to carry out a wide range of statistical analyses including analysis of variance and regression; how to create professional looking graphs; and how to present your results. New in this edition: a completely revised chapter on graphics including graph types and their uses, Excel Chart Tools, R graphics commands and producing different chart types in Excel and in R; an expanded range of support material online, including; example data, exercises and additional notes & explanations; a new chapter on basic community statistics, biodiversity and similarity; chapter summaries and end-of-chapter exercises. Praise for the first edition: This book is a superb way in for all those looking at how to design investigations and collect data to support their findings. – Sue Townsend, Biodiversity Learning Manager, Field Studies Council [M]akes it easy for the reader to synthesise R and Excel and there is extra help and sample data available on the free companion webpage if needed. I recommended this text to the university library as well as to colleagues at my student workshops on R. Although I initially bought this book when I wanted to discover R I actually also learned new techniques for data manipulation and management in Excel – Mark Edwards, EcoBlogging A must for anyone getting to grips with data analysis using R and excel. – Amazon 5-star review It has been very easy to follow and will be perfect for anyone. – Amazon 5-star review A solid introduction to working with Excel and R. The writing is clear and informative, the book provides plenty of examples and figures so that each string of code in R or step in Excel is understood by the reader. – Goodreads, 4-star review

Book Synopsis Statistics for Ecologists Using R and Excel by : Mark Gardener

Download or read book Statistics for Ecologists Using R and Excel written by Mark Gardener and published by Pelagic Publishing Ltd. This book was released on 2017-01-16 with total page 503 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a book about the scientific process and how you apply it to data in ecology. You will learn how to plan for data collection, how to assemble data, how to analyze data and finally how to present the results. The book uses Microsoft Excel and the powerful Open Source R program to carry out data handling as well as producing graphs. Statistical approaches covered include: data exploration; tests for difference – t-test and U-test; correlation – Spearman’s rank test and Pearson product-moment; association including Chi-squared tests and goodness of fit; multivariate testing using analysis of variance (ANOVA) and Kruskal–Wallis test; and multiple regression. Key skills taught in this book include: how to plan ecological projects; how to record and assemble your data; how to use R and Excel for data analysis and graphs; how to carry out a wide range of statistical analyses including analysis of variance and regression; how to create professional looking graphs; and how to present your results. New in this edition: a completely revised chapter on graphics including graph types and their uses, Excel Chart Tools, R graphics commands and producing different chart types in Excel and in R; an expanded range of support material online, including; example data, exercises and additional notes & explanations; a new chapter on basic community statistics, biodiversity and similarity; chapter summaries and end-of-chapter exercises. Praise for the first edition: This book is a superb way in for all those looking at how to design investigations and collect data to support their findings. – Sue Townsend, Biodiversity Learning Manager, Field Studies Council [M]akes it easy for the reader to synthesise R and Excel and there is extra help and sample data available on the free companion webpage if needed. I recommended this text to the university library as well as to colleagues at my student workshops on R. Although I initially bought this book when I wanted to discover R I actually also learned new techniques for data manipulation and management in Excel – Mark Edwards, EcoBlogging A must for anyone getting to grips with data analysis using R and excel. – Amazon 5-star review It has been very easy to follow and will be perfect for anyone. – Amazon 5-star review A solid introduction to working with Excel and R. The writing is clear and informative, the book provides plenty of examples and figures so that each string of code in R or step in Excel is understood by the reader. – Goodreads, 4-star review

Statistical Methods for Environmental Pollution Monitoring

Author: Richard O. Gilbert

Publisher: John Wiley & Sons

Published: 1987-02-15

Total Pages: 354

ISBN-13: 9780471288787

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This book discusses a broad range of statistical design and analysis methods that are particularly well suited to pollution data. It explains key statistical techniques in easy-to-comprehend terms and uses practical examples, exercises, and case studies to illustrate procedures. Dr. Gilbert begins by discussing a space-time framework for sampling pollutants. He then shows how to use statistical sample survey methods to estimate average and total amounts of pollutants in the environment, and how to determine the number of field samples and measurements to collect for this purpose. Then a broad range of statistical analysis methods are described and illustrated. These include: * determining the number of samples needed to find hot spots * analyzing pollution data that are lognormally distributed * testing for trends over time or space * estimating the magnitude of trends * comparing pollution data from two or more populations New areas discussed in this sourcebook include statistical techniques for data that are correlated, reported as less than the measurement detection limit, or obtained from field-composited samples. Nonparametric statistical analysis methods are emphasized since parametric procedures are often not appropriate for pollution data. This book also provides an illustrated comprehensive computer code for nonparametric trend detection and estimation analyses as well as nineteen statistical tables to permit easy application of the discussed statistical techniques. In addition, many publications are cited that deal with the design of pollution studies and the statistical analysis of pollution data. This sourcebook will be a useful tool for applied statisticians, ecologists, radioecologists, hydrologists, biologists, environmental engineers, and other professionals who deal with the collection, analysis, and interpretation of pollution in air, water, and soil.

Book Synopsis Statistical Methods for Environmental Pollution Monitoring by : Richard O. Gilbert

Download or read book Statistical Methods for Environmental Pollution Monitoring written by Richard O. Gilbert and published by John Wiley & Sons. This book was released on 1987-02-15 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book discusses a broad range of statistical design and analysis methods that are particularly well suited to pollution data. It explains key statistical techniques in easy-to-comprehend terms and uses practical examples, exercises, and case studies to illustrate procedures. Dr. Gilbert begins by discussing a space-time framework for sampling pollutants. He then shows how to use statistical sample survey methods to estimate average and total amounts of pollutants in the environment, and how to determine the number of field samples and measurements to collect for this purpose. Then a broad range of statistical analysis methods are described and illustrated. These include: * determining the number of samples needed to find hot spots * analyzing pollution data that are lognormally distributed * testing for trends over time or space * estimating the magnitude of trends * comparing pollution data from two or more populations New areas discussed in this sourcebook include statistical techniques for data that are correlated, reported as less than the measurement detection limit, or obtained from field-composited samples. Nonparametric statistical analysis methods are emphasized since parametric procedures are often not appropriate for pollution data. This book also provides an illustrated comprehensive computer code for nonparametric trend detection and estimation analyses as well as nineteen statistical tables to permit easy application of the discussed statistical techniques. In addition, many publications are cited that deal with the design of pollution studies and the statistical analysis of pollution data. This sourcebook will be a useful tool for applied statisticians, ecologists, radioecologists, hydrologists, biologists, environmental engineers, and other professionals who deal with the collection, analysis, and interpretation of pollution in air, water, and soil.