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Available online: https://pub.norden.org/temanord2020-538/ Over 75% of all lakes and 40% of all rivers in the EU are found in the Nordic countries. Biomonitoring according to the EU Water Framework Directive (WFD) is adopted by all Nordic countries and forms an integral part of management efforts to preserve and restore the ecological quality of freshwaters and their ecosystem services. Organisms used in WFD biomonitoring are identified by experts; this is time consuming and error prone. Molecular identification methods could be used but have not been tested for monitoring. We compared molecular to expert identification for samples from 297 Nordic lakes and streams. The DNA-based results were highly similar to expert identifications. We suggest that Nordic or European efforts towards implementation and standardization of DNA-based methodology should be undertaken to swiftly ensure the use of this promising tool in future WFD monitoring.
Book Synopsis Metabarcoding for use in Nordic routine aquatic biomonitoring: a validation study by : Meissner, Kristian
Download or read book Metabarcoding for use in Nordic routine aquatic biomonitoring: a validation study written by Meissner, Kristian and published by Nordic Council of Ministers. This book was released on 2021-01-12 with total page 101 pages. Available in PDF, EPUB and Kindle. Book excerpt: Available online: https://pub.norden.org/temanord2020-538/ Over 75% of all lakes and 40% of all rivers in the EU are found in the Nordic countries. Biomonitoring according to the EU Water Framework Directive (WFD) is adopted by all Nordic countries and forms an integral part of management efforts to preserve and restore the ecological quality of freshwaters and their ecosystem services. Organisms used in WFD biomonitoring are identified by experts; this is time consuming and error prone. Molecular identification methods could be used but have not been tested for monitoring. We compared molecular to expert identification for samples from 297 Nordic lakes and streams. The DNA-based results were highly similar to expert identifications. We suggest that Nordic or European efforts towards implementation and standardization of DNA-based methodology should be undertaken to swiftly ensure the use of this promising tool in future WFD monitoring.
In aquatic ecosystems, the oligochaetes are often a major component of the community. Their relevance in sediment quality assessment is largely related to their benthic and detritivorous life habit. In this book, we aim to present the state of the art of Pollution Biology using oligochaete worms in laboratory and field studies. Future research will require the combination of a variety of methodological approaches and the integration of the resulting information, avoiding fragmented and often conflicting visions of the relationships of the species with their environment. Current approaches to ecotoxicology and bioaccumulation using ecological risk assessment provide the opportunity to relate community studies with probability of effects. This book addresses three main themes: Ecological and Field Studies using the composition and structure of oligochaete communities, Toxicology and Laboratory Studies, and Bioaccumulation and Trophic Transfer Studies. Two appendices list values of toxicological parameters (LC50, EC50) and several bioaccumulation variables (bioaccumulation factors, biological half-life, toxicokinetic coefficients, and critical body residues) for different oligochaete species. Additional information is provided on Methodological Issues and on the Taxonomy of several oligochaete families, with information on the most recent taxonomic debates. Each chapter includes a critical view, based on the authors’ experience, of a number of current issues which have been raised in the literature.
Book Synopsis The Pollution Biology of Aquatic Oligochaetes by : Pilar Rodriguez
Download or read book The Pollution Biology of Aquatic Oligochaetes written by Pilar Rodriguez and published by Springer Science & Business Media. This book was released on 2011-08-30 with total page 271 pages. Available in PDF, EPUB and Kindle. Book excerpt: In aquatic ecosystems, the oligochaetes are often a major component of the community. Their relevance in sediment quality assessment is largely related to their benthic and detritivorous life habit. In this book, we aim to present the state of the art of Pollution Biology using oligochaete worms in laboratory and field studies. Future research will require the combination of a variety of methodological approaches and the integration of the resulting information, avoiding fragmented and often conflicting visions of the relationships of the species with their environment. Current approaches to ecotoxicology and bioaccumulation using ecological risk assessment provide the opportunity to relate community studies with probability of effects. This book addresses three main themes: Ecological and Field Studies using the composition and structure of oligochaete communities, Toxicology and Laboratory Studies, and Bioaccumulation and Trophic Transfer Studies. Two appendices list values of toxicological parameters (LC50, EC50) and several bioaccumulation variables (bioaccumulation factors, biological half-life, toxicokinetic coefficients, and critical body residues) for different oligochaete species. Additional information is provided on Methodological Issues and on the Taxonomy of several oligochaete families, with information on the most recent taxonomic debates. Each chapter includes a critical view, based on the authors’ experience, of a number of current issues which have been raised in the literature.
The content is focused on benthic communities showing how they play an in important role in the river ecosystems. Provides also information on taxonomy of river-inhabiting algal groups, including phylogeny, distribution, collection, preservation and description of the most representative genera of algae in river benthic algal communities. The book also approaches the ecology of river algae not to mention the ecological factors influencing abundance, distribution and diversity of river benthic algal communities and their use as bio-indicators, providing an up-to-date information on taxonomy, ecology, methodology and uses, and a great source of research to everyone interested in freshwater algae, limnology, water quality assessment and biodiversity in river ecosystems.
Book Synopsis River Algae by : Orlando Necchi JR
Download or read book River Algae written by Orlando Necchi JR and published by Springer. This book was released on 2016-06-02 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: The content is focused on benthic communities showing how they play an in important role in the river ecosystems. Provides also information on taxonomy of river-inhabiting algal groups, including phylogeny, distribution, collection, preservation and description of the most representative genera of algae in river benthic algal communities. The book also approaches the ecology of river algae not to mention the ecological factors influencing abundance, distribution and diversity of river benthic algal communities and their use as bio-indicators, providing an up-to-date information on taxonomy, ecology, methodology and uses, and a great source of research to everyone interested in freshwater algae, limnology, water quality assessment and biodiversity in river ecosystems.
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functional genes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is now a rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using a diversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmental DNA.
Book Synopsis Environmental DNA by : Pierre Taberlet
Download or read book Environmental DNA written by Pierre Taberlet and published by Oxford University Press. This book was released on 2018-02-02 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functional genes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is now a rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using a diversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmental DNA.
Book Synopsis Freshwater Benthic Diatoms of Central Europe by : Horst Lange-Bertalot
Download or read book Freshwater Benthic Diatoms of Central Europe written by Horst Lange-Bertalot and published by . This book was released on 2003 with total page 942 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Intermittent Rivers and Ephemeral Streams: Ecology and Management takes an internationally broad approach, seeking to compare and contrast findings across multiple continents, climates, flow regimes, and land uses to provide a complete and integrated perspective on the ecology of these ecosystems. Coupled with this, users will find a discussion of management approaches applicable in different regions that are illustrated with relevant case studies. In a readable and technically accurate style, the book utilizes logically framed chapters authored by experts in the field, allowing managers and policymakers to readily grasp ecological concepts and their application to specific situations. Provides up-to-date reviews of research findings and management strategies using international examples Explores themes and parallels across diverse sub-disciplines in ecology and water resource management utilizing a multidisciplinary and integrative approach Reveals the relevance of this scientific understanding to managers and policymakers
Book Synopsis Intermittent Rivers and Ephemeral Streams by : Thibault Datry
Download or read book Intermittent Rivers and Ephemeral Streams written by Thibault Datry and published by Academic Press. This book was released on 2017-07-11 with total page 622 pages. Available in PDF, EPUB and Kindle. Book excerpt: Intermittent Rivers and Ephemeral Streams: Ecology and Management takes an internationally broad approach, seeking to compare and contrast findings across multiple continents, climates, flow regimes, and land uses to provide a complete and integrated perspective on the ecology of these ecosystems. Coupled with this, users will find a discussion of management approaches applicable in different regions that are illustrated with relevant case studies. In a readable and technically accurate style, the book utilizes logically framed chapters authored by experts in the field, allowing managers and policymakers to readily grasp ecological concepts and their application to specific situations. Provides up-to-date reviews of research findings and management strategies using international examples Explores themes and parallels across diverse sub-disciplines in ecology and water resource management utilizing a multidisciplinary and integrative approach Reveals the relevance of this scientific understanding to managers and policymakers
Book Synopsis Coastal lagoons by : Pierre Lasserre
Download or read book Coastal lagoons written by Pierre Lasserre and published by . This book was released on 1982 with total page 484 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Population genomics has revolutionized various disciplines of biology including population, evolutionary, ecological and conservation genetics, plant and animal breeding, human health, medicine and pharmacology by allowing to address novel and long-standing questions with unprecedented power and accuracy. It employs large-scale or genome-wide genetic information and bioinformatics to address various fundamental and applied aspects in biology and related disciplines, and provides a comprehensive genome-wide perspective and new insights that were not possible before. These advances have become possible due to the development of new and low-cost sequencing and genotyping technologies and novel statistical approaches and software, bioinformatics tools, and models. Population genomics is tremendously advancing our understanding the roles of evolutionary processes, such as mutation, genetic drift, gene flow, and natural selection, in shaping up genetic variation at individual loci and across the genome and populations; improving the assessment of population genetic parameters or processes such as adaptive evolution, effective population size, gene flow, admixture, inbreeding and outbreeding depression, demography, and biogeography; resolving evolutionary histories and phylogenetic relationships of extant, ancient and extinct species; understanding the genomic basis of fitness, adaptation, speciation, complex ecological and economically important traits, and disease and insect resistance; facilitating forensics, genetic medicine and pharmacology; delineating conservation genetic units; and understanding the genetic effects of resource management practices, and assisting conservation and sustainable management of genetic resources. This Population Genomics book discusses the concepts, approaches, applications and promises of population genomics in addressing most of the above fundamental and applied crucial aspects in a variety of organisms from microorganisms to humans. The book provides insights into a range of emerging population genomics topics including population epigenomics, landscape genomics, seascape genomics, paleogenomics, ecological and evolutionary genomics, biogeography, demography, speciation, admixture, colonization and invasion, genomic selection, and plant and animal domestication. This book fills a vacuum in the field and is expected to become a primary reference in Population Genomics world-wide.
Book Synopsis Population Genomics by : Om P. Rajora
Download or read book Population Genomics written by Om P. Rajora and published by Springer. This book was released on 2019-01-07 with total page 822 pages. Available in PDF, EPUB and Kindle. Book excerpt: Population genomics has revolutionized various disciplines of biology including population, evolutionary, ecological and conservation genetics, plant and animal breeding, human health, medicine and pharmacology by allowing to address novel and long-standing questions with unprecedented power and accuracy. It employs large-scale or genome-wide genetic information and bioinformatics to address various fundamental and applied aspects in biology and related disciplines, and provides a comprehensive genome-wide perspective and new insights that were not possible before. These advances have become possible due to the development of new and low-cost sequencing and genotyping technologies and novel statistical approaches and software, bioinformatics tools, and models. Population genomics is tremendously advancing our understanding the roles of evolutionary processes, such as mutation, genetic drift, gene flow, and natural selection, in shaping up genetic variation at individual loci and across the genome and populations; improving the assessment of population genetic parameters or processes such as adaptive evolution, effective population size, gene flow, admixture, inbreeding and outbreeding depression, demography, and biogeography; resolving evolutionary histories and phylogenetic relationships of extant, ancient and extinct species; understanding the genomic basis of fitness, adaptation, speciation, complex ecological and economically important traits, and disease and insect resistance; facilitating forensics, genetic medicine and pharmacology; delineating conservation genetic units; and understanding the genetic effects of resource management practices, and assisting conservation and sustainable management of genetic resources. This Population Genomics book discusses the concepts, approaches, applications and promises of population genomics in addressing most of the above fundamental and applied crucial aspects in a variety of organisms from microorganisms to humans. The book provides insights into a range of emerging population genomics topics including population epigenomics, landscape genomics, seascape genomics, paleogenomics, ecological and evolutionary genomics, biogeography, demography, speciation, admixture, colonization and invasion, genomic selection, and plant and animal domestication. This book fills a vacuum in the field and is expected to become a primary reference in Population Genomics world-wide.
This much revised and expanded edition provides a valuable and detailed summary of the many uses of diatoms in a wide range of applications in the environmental and earth sciences. Particular emphasis is placed on the use of diatoms in analysing ecological problems related to climate change, acidification, eutrophication, and other pollution issues. The chapters are divided into sections for easy reference, with separate sections covering indicators in different aquatic environments. A final section explores diatom use in other fields of study such as forensics, oil and gas exploration, nanotechnology, and archaeology. Sixteen new chapters have been added since the first edition, including introductory chapters on diatom biology and the numerical approaches used by diatomists. The extensive glossary has also been expanded and now includes over 1,000 detailed entries, which will help non-specialists to use the book effectively.
Book Synopsis The Diatoms by : John P. Smol
Download or read book The Diatoms written by John P. Smol and published by Cambridge University Press. This book was released on 2010-09-30 with total page 687 pages. Available in PDF, EPUB and Kindle. Book excerpt: This much revised and expanded edition provides a valuable and detailed summary of the many uses of diatoms in a wide range of applications in the environmental and earth sciences. Particular emphasis is placed on the use of diatoms in analysing ecological problems related to climate change, acidification, eutrophication, and other pollution issues. The chapters are divided into sections for easy reference, with separate sections covering indicators in different aquatic environments. A final section explores diatom use in other fields of study such as forensics, oil and gas exploration, nanotechnology, and archaeology. Sixteen new chapters have been added since the first edition, including introductory chapters on diatom biology and the numerical approaches used by diatomists. The extensive glossary has also been expanded and now includes over 1,000 detailed entries, which will help non-specialists to use the book effectively.
Cyanobacteria have existed for 3.5 billion years, yet they are still the most important photosynthetic organisms on the planet for cycling carbon and nitrogen. The ecosystems where they have key roles range from the warmer oceans to many Antarctic sites. They also include dense nuisance growths in nutrient-rich lakes and nitrogen-fixers which aid the fertility of rice-fields and many soils, especially the biological soil crusts of arid regions. Molecular biology has in recent years provided major advances in our understanding of cyanobacterial ecology. Perhaps for more than any other group of organisms, it is possible to see how the ecology, physiology, biochemistry, ultrastructure and molecular biology interact. This all helps to deal with practical problems such as the control of nuisance blooms and the use of cyanobacterial inocula to manage semi-desert soils. Large-scale culture of several organisms, especially "Spirulina" (Arthrospira), for health food and specialist products is increasingly being expanded for a much wider range of uses. In view of their probable contribution to past oil deposits, much attention is currently focused on their potential as a source of biofuel. Please visit http://extras.springer.com/ to view Extra Materials belonging to this volume. This book complements the highly successful Ecology of Cyanobacteria and integrates the discoveries of the past twelve years with the older literature.
Book Synopsis Ecology of Cyanobacteria II by : Brian A. Whitton
Download or read book Ecology of Cyanobacteria II written by Brian A. Whitton and published by Springer Science & Business Media. This book was released on 2012-07-05 with total page 753 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cyanobacteria have existed for 3.5 billion years, yet they are still the most important photosynthetic organisms on the planet for cycling carbon and nitrogen. The ecosystems where they have key roles range from the warmer oceans to many Antarctic sites. They also include dense nuisance growths in nutrient-rich lakes and nitrogen-fixers which aid the fertility of rice-fields and many soils, especially the biological soil crusts of arid regions. Molecular biology has in recent years provided major advances in our understanding of cyanobacterial ecology. Perhaps for more than any other group of organisms, it is possible to see how the ecology, physiology, biochemistry, ultrastructure and molecular biology interact. This all helps to deal with practical problems such as the control of nuisance blooms and the use of cyanobacterial inocula to manage semi-desert soils. Large-scale culture of several organisms, especially "Spirulina" (Arthrospira), for health food and specialist products is increasingly being expanded for a much wider range of uses. In view of their probable contribution to past oil deposits, much attention is currently focused on their potential as a source of biofuel. Please visit http://extras.springer.com/ to view Extra Materials belonging to this volume. This book complements the highly successful Ecology of Cyanobacteria and integrates the discoveries of the past twelve years with the older literature.
