New Approaches to Prokaryotic Systematics

New Approaches to Prokaryotic Systematics

Author: Michael Goodfellow

Publisher: Academic Press

Published: 2014-11-24

Total Pages: 368

ISBN-13: 0128004436

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Volume 41 of Methods in Microbiology is a methods book designed to highlight procedures that will revitalize the purposes and practices of prokaryotic systematics.This volume will notably show that genomics and computational biology are pivotal to the new direction of travel and will emphasise that new developments need to be built upon historical good practices, notably the continued use of the nomenclatural type concept and the requirement to deposit type strains in at least two service culture collections in different countries. Detailed protocols on cutting edge methods Prepared by leading international experts in the relevant fields


Book Synopsis New Approaches to Prokaryotic Systematics by : Michael Goodfellow

Download or read book New Approaches to Prokaryotic Systematics written by Michael Goodfellow and published by Academic Press. This book was released on 2014-11-24 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: Volume 41 of Methods in Microbiology is a methods book designed to highlight procedures that will revitalize the purposes and practices of prokaryotic systematics.This volume will notably show that genomics and computational biology are pivotal to the new direction of travel and will emphasise that new developments need to be built upon historical good practices, notably the continued use of the nomenclatural type concept and the requirement to deposit type strains in at least two service culture collections in different countries. Detailed protocols on cutting edge methods Prepared by leading international experts in the relevant fields

Modern Taxonomy of Bacteria and Archaea

Modern Taxonomy of Bacteria and Archaea

Author: Wen-Jun Li

Publisher: Springer

Published: 2024-04-20

Total Pages: 0

ISBN-13: 9789819957194

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This book introduces the current approaches in prokaryotic taxonomy and streamlines the advanced techniques for use in prokaryotic systematics. While highlighting the key differences in the taxonomy of cultured and not-yet-cultured bacteria and archaea, it presents the genomic technology involved in microbial systematics that serves as comprehensive guidelines for isolating and identifying bacteria. Microbial systematics is a fundamentally important discipline area for microbiologists and those seeking to understand Earth’s biodiversity. As bacterial taxonomy is critical in microbial ecology and clinical microbiology works, the correct identification of microbes is crucial. However, the microbial collection existing and described as cultured species so far are either based on the taxonomic pattern that existed during its time of first cultivation. With evolving technology, many microbes were found to be wrongly classified. Therefore, it is essential to keep in contact withthe developing technology and methods for the correct placement of cultured bacteria and their identification. This book is an excellent guideline for adequately identifying, classifying, and describing novel taxa of bacteria and archaea.


Book Synopsis Modern Taxonomy of Bacteria and Archaea by : Wen-Jun Li

Download or read book Modern Taxonomy of Bacteria and Archaea written by Wen-Jun Li and published by Springer. This book was released on 2024-04-20 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces the current approaches in prokaryotic taxonomy and streamlines the advanced techniques for use in prokaryotic systematics. While highlighting the key differences in the taxonomy of cultured and not-yet-cultured bacteria and archaea, it presents the genomic technology involved in microbial systematics that serves as comprehensive guidelines for isolating and identifying bacteria. Microbial systematics is a fundamentally important discipline area for microbiologists and those seeking to understand Earth’s biodiversity. As bacterial taxonomy is critical in microbial ecology and clinical microbiology works, the correct identification of microbes is crucial. However, the microbial collection existing and described as cultured species so far are either based on the taxonomic pattern that existed during its time of first cultivation. With evolving technology, many microbes were found to be wrongly classified. Therefore, it is essential to keep in contact withthe developing technology and methods for the correct placement of cultured bacteria and their identification. This book is an excellent guideline for adequately identifying, classifying, and describing novel taxa of bacteria and archaea.

Chemical Methods in Prokaryotic Systematics

Chemical Methods in Prokaryotic Systematics

Author: Michael Goodfellow

Publisher:

Published: 1994-08-02

Total Pages: 618

ISBN-13:

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The use of chemical techniques is having a profound effect on approaches to the characterization, classification and identification of prokaryotes, i.e. archaea and bacteria. This book provides a comprehensive, up-to-date treatment of such methods used in prokaryotic systematics and is written by leading specialists in this field. Designed as a laboratory manual, this volume describes the latest applications to prokaryote systematics of powerful techniques such as protein electrophoresis, pyrolysis mass spectrometry and rapid enzyme testing. The extraction, purification and characterization of specific components such as fatty acids, lipid A, peptidoglycan, pigments (carotenoids and bacteriochlorophylls) and isoprenoid quinones are explained. The value of these methods in the circumscription and identification of archaea and bacteria is demonstrated. The book is aimed at microbiologists and microbial technologists interested in characterizing and identifying bacteria.


Book Synopsis Chemical Methods in Prokaryotic Systematics by : Michael Goodfellow

Download or read book Chemical Methods in Prokaryotic Systematics written by Michael Goodfellow and published by . This book was released on 1994-08-02 with total page 618 pages. Available in PDF, EPUB and Kindle. Book excerpt: The use of chemical techniques is having a profound effect on approaches to the characterization, classification and identification of prokaryotes, i.e. archaea and bacteria. This book provides a comprehensive, up-to-date treatment of such methods used in prokaryotic systematics and is written by leading specialists in this field. Designed as a laboratory manual, this volume describes the latest applications to prokaryote systematics of powerful techniques such as protein electrophoresis, pyrolysis mass spectrometry and rapid enzyme testing. The extraction, purification and characterization of specific components such as fatty acids, lipid A, peptidoglycan, pigments (carotenoids and bacteriochlorophylls) and isoprenoid quinones are explained. The value of these methods in the circumscription and identification of archaea and bacteria is demonstrated. The book is aimed at microbiologists and microbial technologists interested in characterizing and identifying bacteria.

Molecular Identification, Systematics, and Population Structure of Prokaryotes

Molecular Identification, Systematics, and Population Structure of Prokaryotes

Author: Erko Stackebrandt

Publisher: Springer Science & Business Media

Published: 2010-09-08

Total Pages: 328

ISBN-13: 3540312927

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Systematic biology has a far wider application than merely the provision of a reliable classification scheme for new strains. With the framework of the hierarchic system stabilizing, genomes, noncoding regions, and genes and their products can now be evaluated in an evolutionary context. This book summarizes recent developments in the molecular characterization of cultured and as-yet uncultured prokaryotes, emphasizing the strengths and weaknesses of individual approaches. The chapters of the book are compiled to stimulate students to enter the field of bacterial diversity, presenting a broad spectrum of fascinating multifaceted disciplines that illuminate the paths to ecosystem functioning, communication within communities, symbiosis, life in extreme environments, astrobiology, and more.


Book Synopsis Molecular Identification, Systematics, and Population Structure of Prokaryotes by : Erko Stackebrandt

Download or read book Molecular Identification, Systematics, and Population Structure of Prokaryotes written by Erko Stackebrandt and published by Springer Science & Business Media. This book was released on 2010-09-08 with total page 328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systematic biology has a far wider application than merely the provision of a reliable classification scheme for new strains. With the framework of the hierarchic system stabilizing, genomes, noncoding regions, and genes and their products can now be evaluated in an evolutionary context. This book summarizes recent developments in the molecular characterization of cultured and as-yet uncultured prokaryotes, emphasizing the strengths and weaknesses of individual approaches. The chapters of the book are compiled to stimulate students to enter the field of bacterial diversity, presenting a broad spectrum of fascinating multifaceted disciplines that illuminate the paths to ecosystem functioning, communication within communities, symbiosis, life in extreme environments, astrobiology, and more.

The Pangenome

The Pangenome

Author: Hervé Tettelin

Publisher: Springer Nature

Published: 2020-04-30

Total Pages: 311

ISBN-13: 3030382818

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This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.


Book Synopsis The Pangenome by : Hervé Tettelin

Download or read book The Pangenome written by Hervé Tettelin and published by Springer Nature. This book was released on 2020-04-30 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.

Biology of the Prokaryotes

Biology of the Prokaryotes

Author: Joseph W. Lengeler

Publisher: John Wiley & Sons

Published: 2009-07-10

Total Pages: 984

ISBN-13: 1444313304

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Designed as an upper-level textbook and a reference for researchers, this important book concentrates on central concepts of the bacterial lifestyle. Taking a refreshingly new approach, it present an integrated view of the prokaryotic cell as an organism and as a member of an interacting population. Beginning with a description of cellular structures, the text proceeds through metabolic pathways and metabolic reactions to the genes and regulatory mechanisms. At a higher level of complexity, a discussion of cell differentiation processes is followed by a description of the diversity of prokaryotes and their role in the biosphere. A closing section deals with man and microbes (ie, applied microbiology). The first text to adopt an integrated view of the prokaryotic cell as an organism and as a member of a population. Vividly illustrates the diversity of the prokaryotic world - nearly all the metabolic diversity in living organisms is found in microbes. New developments in applied microbiology highlighted. Extensive linking between related topics allows easy navigation through the book. Essential definitions and conclusions highlighted. Supplementary information in boxes.


Book Synopsis Biology of the Prokaryotes by : Joseph W. Lengeler

Download or read book Biology of the Prokaryotes written by Joseph W. Lengeler and published by John Wiley & Sons. This book was released on 2009-07-10 with total page 984 pages. Available in PDF, EPUB and Kindle. Book excerpt: Designed as an upper-level textbook and a reference for researchers, this important book concentrates on central concepts of the bacterial lifestyle. Taking a refreshingly new approach, it present an integrated view of the prokaryotic cell as an organism and as a member of an interacting population. Beginning with a description of cellular structures, the text proceeds through metabolic pathways and metabolic reactions to the genes and regulatory mechanisms. At a higher level of complexity, a discussion of cell differentiation processes is followed by a description of the diversity of prokaryotes and their role in the biosphere. A closing section deals with man and microbes (ie, applied microbiology). The first text to adopt an integrated view of the prokaryotic cell as an organism and as a member of a population. Vividly illustrates the diversity of the prokaryotic world - nearly all the metabolic diversity in living organisms is found in microbes. New developments in applied microbiology highlighted. Extensive linking between related topics allows easy navigation through the book. Essential definitions and conclusions highlighted. Supplementary information in boxes.

Methods in Microbiology

Methods in Microbiology

Author:

Publisher: Academic Press

Published: 2021-07-07

Total Pages: 216

ISBN-13: 0128211466

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The book Methods in Silkworm Microbiology is the first ever publication that provides in-depth reviews on the latest progresses about silkworm –pathogen interactions, diseases and management practices for sustainable development of sericulture. Different molecular and immunodiagnostic methods for the detection of pathogens have been comprehensively addressed. Most recent advancements on the role of Micro RNAs in silkworm and pathogen interactions are provided with suitable illustrations. Recent technological advances and emerging trends in exploring silkworm gut microbial communities towards translation research, particularly to understand microbiome functions have been highlighted. Information on various immune mechanisms of silkworm against invading pathogens is summarized. The book further highlights the silkworm gut microbiota as a potential source for biotechnological applications. Provide comprehensive reviews and valuable methods from the selected experts on the topic "Methods in silkworm microbiology/pathology" Provides latest information on application of genomics and transcriptomics to decipher silkworm gut microbial communities. Different molecular and immunodiagnostic methods for the detection of pathogens have been comprehensively addressed Provides up to date information on silkworm-pathogen interactions, different silkworm diseases and immune mechanisms


Book Synopsis Methods in Microbiology by :

Download or read book Methods in Microbiology written by and published by Academic Press. This book was released on 2021-07-07 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book Methods in Silkworm Microbiology is the first ever publication that provides in-depth reviews on the latest progresses about silkworm –pathogen interactions, diseases and management practices for sustainable development of sericulture. Different molecular and immunodiagnostic methods for the detection of pathogens have been comprehensively addressed. Most recent advancements on the role of Micro RNAs in silkworm and pathogen interactions are provided with suitable illustrations. Recent technological advances and emerging trends in exploring silkworm gut microbial communities towards translation research, particularly to understand microbiome functions have been highlighted. Information on various immune mechanisms of silkworm against invading pathogens is summarized. The book further highlights the silkworm gut microbiota as a potential source for biotechnological applications. Provide comprehensive reviews and valuable methods from the selected experts on the topic "Methods in silkworm microbiology/pathology" Provides latest information on application of genomics and transcriptomics to decipher silkworm gut microbial communities. Different molecular and immunodiagnostic methods for the detection of pathogens have been comprehensively addressed Provides up to date information on silkworm-pathogen interactions, different silkworm diseases and immune mechanisms

International Code of Phylogenetic Nomenclature (PhyloCode)

International Code of Phylogenetic Nomenclature (PhyloCode)

Author: Kevin de Queiroz

Publisher: CRC Press

Published: 2020-04-29

Total Pages: 99

ISBN-13: 0429821352

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The PhyloCode is a set of principles, rules, and recommendations governing phylogenetic nomenclature, a system for naming taxa by explicit reference to phylogeny. In contrast, the current botanical, zoological, and bacteriological codes define taxa by reference to taxonomic ranks (e.g., family, genus) and types. This code will govern the names of clades; species names will still be governed by traditional codes. The PhyloCode is designed so that it can be used concurrently with the rank-based codes. It is not meant to replace existing names but to provide an alternative system for governing the application of both existing and newly proposed names. Key Features Provides clear regulations for naming clades Based on expressly phylogenetic principles Complements existing codes of nomenclature Eliminates the reliance on taxonomic ranks in favor of phylogenetic relationships Related Titles: Rieppel, O. Phylogenetic Systematics: Haeckel to Hennig (ISBN 978-1-4987-5488-0) de Queiroz, K., Cantino, P. D. and Gauthier, J. A. Phylonyms: A Companion to the PhyloCode (ISBN 978-1-138-33293-5).


Book Synopsis International Code of Phylogenetic Nomenclature (PhyloCode) by : Kevin de Queiroz

Download or read book International Code of Phylogenetic Nomenclature (PhyloCode) written by Kevin de Queiroz and published by CRC Press. This book was released on 2020-04-29 with total page 99 pages. Available in PDF, EPUB and Kindle. Book excerpt: The PhyloCode is a set of principles, rules, and recommendations governing phylogenetic nomenclature, a system for naming taxa by explicit reference to phylogeny. In contrast, the current botanical, zoological, and bacteriological codes define taxa by reference to taxonomic ranks (e.g., family, genus) and types. This code will govern the names of clades; species names will still be governed by traditional codes. The PhyloCode is designed so that it can be used concurrently with the rank-based codes. It is not meant to replace existing names but to provide an alternative system for governing the application of both existing and newly proposed names. Key Features Provides clear regulations for naming clades Based on expressly phylogenetic principles Complements existing codes of nomenclature Eliminates the reliance on taxonomic ranks in favor of phylogenetic relationships Related Titles: Rieppel, O. Phylogenetic Systematics: Haeckel to Hennig (ISBN 978-1-4987-5488-0) de Queiroz, K., Cantino, P. D. and Gauthier, J. A. Phylonyms: A Companion to the PhyloCode (ISBN 978-1-138-33293-5).

The BISMiS 2011 Prokaryotic Systematics

The BISMiS 2011 Prokaryotic Systematics

Author: Bergey's International Society for Microbial Systematics

Publisher:

Published: 2012

Total Pages: 193

ISBN-13:

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Book Synopsis The BISMiS 2011 Prokaryotic Systematics by : Bergey's International Society for Microbial Systematics

Download or read book The BISMiS 2011 Prokaryotic Systematics written by Bergey's International Society for Microbial Systematics and published by . This book was released on 2012 with total page 193 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Microbial Systematics

Microbial Systematics

Author: Bhagwan Rekadwad

Publisher: CRC Press

Published: 2020-11-01

Total Pages: 260

ISBN-13: 0429620810

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This book presents recent scientific investigations in microbial ecology and systematics. Advanced microbial science investigations employ the latest technologies for research in microbiology and microbial applications. The book has complete information on classical microbiology techniques for assessment of the composition of microbial diversity assessment, advancement in next-generation technology, advantages of microbial products in sustainable developments and their application for societal benefits. Current research on microorganisms is presented as a perfect book for studies on "Microbial Systematics". This book will serve as an important resource for practising research and review for the scientific community.


Book Synopsis Microbial Systematics by : Bhagwan Rekadwad

Download or read book Microbial Systematics written by Bhagwan Rekadwad and published by CRC Press. This book was released on 2020-11-01 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents recent scientific investigations in microbial ecology and systematics. Advanced microbial science investigations employ the latest technologies for research in microbiology and microbial applications. The book has complete information on classical microbiology techniques for assessment of the composition of microbial diversity assessment, advancement in next-generation technology, advantages of microbial products in sustainable developments and their application for societal benefits. Current research on microorganisms is presented as a perfect book for studies on "Microbial Systematics". This book will serve as an important resource for practising research and review for the scientific community.