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Phylogeography is a discipline concerned with various relationships between gene genealogies—phylogenetics—and geography. This book captures the conceptual and empirical richness of the field, and also the sense of genuine innovation that phylogeographic perspectives have brought to evolutionary studies.
Book Synopsis Phylogeography by : John C. Avise
Download or read book Phylogeography written by John C. Avise and published by Harvard University Press. This book was released on 2000-01-03 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogeography is a discipline concerned with various relationships between gene genealogies—phylogenetics—and geography. This book captures the conceptual and empirical richness of the field, and also the sense of genuine innovation that phylogeographic perspectives have brought to evolutionary studies.
Phylogeography of California examines the evolution of a variety of taxaÑancient and recent, native and migratoryÑto elucidate evolutionary events both major and minor that shaped the distribution, radiation, and speciation of the biota of California. The book also interprets evolutionary history in a geological context and reviews new and emerging phylogeographic patterns. Focusing on a region that is defined by physical and political boundaries, Kristina A. Schierenbeck provides a phylogeographic survey of CaliforniaÕs diverse flora and fauna according to their major organismal groups. Life history and ecological characteristics, which play prominent roles in the various outcomes for respective clades, are also considered throughout the work. Supporting scholars and researchers who study evolutionary diversification, the book analyzes research that helps assess one of the major challenges in phylogeographic studies: understanding changes in population structures shaped by geological and geographical processes. California is one of only twenty-five acknowledged biological hotspots worldwide, and the phylogeographic history of the state can be extrapolated to study other regions in western North America. Further consideration is given to implications for conservation, recommendations concerning the biogeographic provinces that roughly define the state of California, and predictions related to climate change.
Book Synopsis Phylogeography of California by : Kristina A. Schierenbeck
Download or read book Phylogeography of California written by Kristina A. Schierenbeck and published by Univ of California Press. This book was released on 2014-08-26 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogeography of California examines the evolution of a variety of taxaÑancient and recent, native and migratoryÑto elucidate evolutionary events both major and minor that shaped the distribution, radiation, and speciation of the biota of California. The book also interprets evolutionary history in a geological context and reviews new and emerging phylogeographic patterns. Focusing on a region that is defined by physical and political boundaries, Kristina A. Schierenbeck provides a phylogeographic survey of CaliforniaÕs diverse flora and fauna according to their major organismal groups. Life history and ecological characteristics, which play prominent roles in the various outcomes for respective clades, are also considered throughout the work. Supporting scholars and researchers who study evolutionary diversification, the book analyzes research that helps assess one of the major challenges in phylogeographic studies: understanding changes in population structures shaped by geological and geographical processes. California is one of only twenty-five acknowledged biological hotspots worldwide, and the phylogeographic history of the state can be extrapolated to study other regions in western North America. Further consideration is given to implications for conservation, recommendations concerning the biogeographic provinces that roughly define the state of California, and predictions related to climate change.
This book provides the first synthesis of the remarkable diversity, evolutionary complexity, and conservation importance of the flora and fauna in the Mediterranean region, with emphasis on the three major peninsular refugia. The book highlights biodiversity importance in Southern Europe for European biota conservation, and includes chapters from authorities in phylogeography: John Avise, Remy Petit, Ettore Randi.
Book Synopsis Phylogeography of Southern European Refugia by : Steven Weiss
Download or read book Phylogeography of Southern European Refugia written by Steven Weiss and published by Springer Science & Business Media. This book was released on 2007-06-04 with total page 371 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides the first synthesis of the remarkable diversity, evolutionary complexity, and conservation importance of the flora and fauna in the Mediterranean region, with emphasis on the three major peninsular refugia. The book highlights biodiversity importance in Southern Europe for European biota conservation, and includes chapters from authorities in phylogeography: John Avise, Remy Petit, Ettore Randi.
Recently, technological progress and the rise of DNA barcoding efforts have led to a significant increase in the availability of molecular datasets on intraspecific variability. Carcinologists and other organismal biologists, who want to use molecular tools to investigate patterns on the scale of populations, face a bewildering variety of genetic m
Book Synopsis Phylogeography and Population Genetics in Crustacea by : Christoph Held
Download or read book Phylogeography and Population Genetics in Crustacea written by Christoph Held and published by CRC Press. This book was released on 2016-04-19 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recently, technological progress and the rise of DNA barcoding efforts have led to a significant increase in the availability of molecular datasets on intraspecific variability. Carcinologists and other organismal biologists, who want to use molecular tools to investigate patterns on the scale of populations, face a bewildering variety of genetic m
The book provides an overview of research on the remarkable diversity, adaptive genetic differentiation, and evolutionary complexity of intertidal macroalgae species. Through incorporating molecular data, ecological niche and model-based phylogeographic inference, this book presents the latest findings and hypotheses on the spatial distribution and evolution of seaweeds in the context of historical climate change (e.g. the Quaternary ice ages), contemporary global warming, and increased anthropogenic influences. The chapters in this book highlight past and current research on seaweed phylogeography and predict the future trends and directions. This book frames a number of research cases to review how biogeographic processes and interactive eco-genetic dynamics shaped the demographic histories of seaweeds, which furthermore enhances our understanding of speciation and diversification in the sea. Dr. Zi-Min Hu is an associate professor at Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China. Dr. Ceridwen Fraser is a senior lecturer at Fenner School of Environment and Society, Australian National University, Canberra, Australia.
Book Synopsis Seaweed Phylogeography by : Zi-Min Hu
Download or read book Seaweed Phylogeography written by Zi-Min Hu and published by Springer. This book was released on 2016-01-04 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book provides an overview of research on the remarkable diversity, adaptive genetic differentiation, and evolutionary complexity of intertidal macroalgae species. Through incorporating molecular data, ecological niche and model-based phylogeographic inference, this book presents the latest findings and hypotheses on the spatial distribution and evolution of seaweeds in the context of historical climate change (e.g. the Quaternary ice ages), contemporary global warming, and increased anthropogenic influences. The chapters in this book highlight past and current research on seaweed phylogeography and predict the future trends and directions. This book frames a number of research cases to review how biogeographic processes and interactive eco-genetic dynamics shaped the demographic histories of seaweeds, which furthermore enhances our understanding of speciation and diversification in the sea. Dr. Zi-Min Hu is an associate professor at Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China. Dr. Ceridwen Fraser is a senior lecturer at Fenner School of Environment and Society, Australian National University, Canberra, Australia.
Phylogeography of California examines the evolution of a variety of taxa—ancient and recent, native and migratory—to elucidate evolutionary events both major and minor that shaped the distribution, radiation, and speciation of the biota of California. The book also interprets evolutionary history in a geological context and reviews new and emerging phylogeographic patterns. Focusing on a region that is defined by physical and political boundaries, Kristina A. Schierenbeck provides a phylogeographic survey of California’s diverse flora and fauna according to their major organismal groups. Life history and ecological characteristics, which play prominent roles in the various outcomes for respective clades, are also considered throughout the work. Supporting scholars and researchers who study evolutionary diversification, the book analyzes research that helps assess one of the major challenges in phylogeographic studies: understanding changes in population structures shaped by geological and geographical processes. California is one of only twenty-five acknowledged biological hotspots worldwide, and the phylogeographic history of the state can be extrapolated to study other regions in western North America. Further consideration is given to implications for conservation, recommendations concerning the biogeographic provinces that roughly define the state of California, and predictions related to climate change.
Book Synopsis Phylogeography of California by : Kristina A. Schierenbeck
Download or read book Phylogeography of California written by Kristina A. Schierenbeck and published by Univ of California Press. This book was released on 2014-08-26 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phylogeography of California examines the evolution of a variety of taxa—ancient and recent, native and migratory—to elucidate evolutionary events both major and minor that shaped the distribution, radiation, and speciation of the biota of California. The book also interprets evolutionary history in a geological context and reviews new and emerging phylogeographic patterns. Focusing on a region that is defined by physical and political boundaries, Kristina A. Schierenbeck provides a phylogeographic survey of California’s diverse flora and fauna according to their major organismal groups. Life history and ecological characteristics, which play prominent roles in the various outcomes for respective clades, are also considered throughout the work. Supporting scholars and researchers who study evolutionary diversification, the book analyzes research that helps assess one of the major challenges in phylogeographic studies: understanding changes in population structures shaped by geological and geographical processes. California is one of only twenty-five acknowledged biological hotspots worldwide, and the phylogeographic history of the state can be extrapolated to study other regions in western North America. Further consideration is given to implications for conservation, recommendations concerning the biogeographic provinces that roughly define the state of California, and predictions related to climate change.
Mapping phylogenetics on geographical scales is one of the most important scientific aspects of bioscience research. Changes in the environment have evidently shaped the geographical distribution of organisms on land and in the oceans seen today. Overexploitation of key species has caused not only changes in the distribution and diversity of organisms and composition of the ecosystems, but is also leading to species extinction at accelerating rates. It is our duty as scientists to find ways of protecting the species endangered with extinction and preventing other species from entering the endangered stage. To manage this effectively, we need to map species distribution, understand life-history traits, define genetic variation within species and populations, identify lineages - especially at the molecular level - and correlate the historical, phylogenetic components with the spatial distributions of gene lineages. In this book, phylogenetics and phylogeography of a diverse range of organisms are reviewed: from microorganisms causing gastroenteritis in humans, fishes in the Southwest Atlantic Ocean and spiders of the western Indian Ocean, to mountain tapirs in South America and birch tree species of the Arctic tundra.
Book Synopsis Current Topics in Phylogenetics and Phylogeography of Terrestrial and Aquatic Systems by : Kesara Anamthawat-Jónsson
Download or read book Current Topics in Phylogenetics and Phylogeography of Terrestrial and Aquatic Systems written by Kesara Anamthawat-Jónsson and published by BoD – Books on Demand. This book was released on 2012-03-07 with total page 160 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mapping phylogenetics on geographical scales is one of the most important scientific aspects of bioscience research. Changes in the environment have evidently shaped the geographical distribution of organisms on land and in the oceans seen today. Overexploitation of key species has caused not only changes in the distribution and diversity of organisms and composition of the ecosystems, but is also leading to species extinction at accelerating rates. It is our duty as scientists to find ways of protecting the species endangered with extinction and preventing other species from entering the endangered stage. To manage this effectively, we need to map species distribution, understand life-history traits, define genetic variation within species and populations, identify lineages - especially at the molecular level - and correlate the historical, phylogenetic components with the spatial distributions of gene lineages. In this book, phylogenetics and phylogeography of a diverse range of organisms are reviewed: from microorganisms causing gastroenteritis in humans, fishes in the Southwest Atlantic Ocean and spiders of the western Indian Ocean, to mountain tapirs in South America and birch tree species of the Arctic tundra.
The overarching theme of my thesis is to explore patterns of larval dispersal as they relate to management of fished marine species. I employed a case study of two species: Megastraea undosa and Parastichopus parvimensis to investigate patterns of phylogeography and assess relative scales of dispersal for these two species which are fished in both California, USA and Baja California, MEX. To examine how some generalities for many species can be made for a specific geographic area, I reviewed all existing phylogeographic studies around Cape Mendocino, CA. Dispersal at a snail's pace: Strong genetic structure in the fisheries gastropod Megastaea undosa. Information about larval dispersal is necessary for effective management of fisheries. Population genetics are often employed to assess dispersal, but these data also carry artifacts from the evolutionary history of a species. I assessed historical and modern demography of the wavy top snail, Megastraea undosa, a marine snail that is fished in California, USA and Baja California, Mexico. Genetic structure at the COI mtDNA locus is strikingly high, with large shifts in haplotype frequencies between southern Baja and southern California. Coalescent-based modeling of genetic data suggests that the population has limited dispersal throughout the range and underwent a northward range expansion after the last glacial maximum. I conclude that both historical and contemporary processes affect observed patterns of phylogeography in M. undosa. Consideration of the evolutionary history of target species allows for a more accurate interpretation of genetic data for management. iv Subtle genetic structure in the commercially fished warty sea cucumber, Parastichopus parvimensis. The warty sea cucumber, P. parvimensis, is fished commercially in both California, USA and Baja California, Mexico but little is known about the status of the fisheries or if separate stocks exist. P. parvimensis has a long pelagic larval duration of 50-90 days, which may translate to high connectivity throughout the species range (Monterey, CA, USA to Bahía Asuncion, BCS, Mexico). I examined phylogeographic patterns at the COI mtDNA locus and five microsatellite loci throughout the range of P. parvimensis and was particularly interested in patterns associated with the potential phylogeographic barriers of Point Conception, CA, USA and Punta Eugenia, BCS, MEX. I found no structure associated with Point Conception, but subtle genetic structure at both types of loci for Punta Eugenia, which may be mechanistically explained by oceanographic patterns. These data have important implications for management of the sea cucumber fishery and indicate that populations south of Punta Eugenia likely do not receive biologically meaningful input of larvae from northern populations to supplement the local fishery. Concordant phylogeographic patterns associated with the major headland of Cape Mendocino in northern California. Most coastlines are non-linear and headlands such as Cape Mendocino may interact with oceanographic processes to create barriers to dispersal. Though Cape Mendocino is a prominent headland, it has been largely ignored in the phylogeographic literature, which focuses instead on Point Conception in southern California. I reviewed and synthesized phylogeographic studies that include sampling sites north and south of Cape Mendocino and discuss the v oceanography and topography of the cape as potential mechanistic drivers of larval dispersal patterns. Slightly more than half (24 out of 46) of the surveyed species that showed significant genetic structure around this headland, which suggests that this headland may be an important barrier to dispersal and may limit connectivity between northern and central California. If populations north of Cape Mendocino have higher connectivity with populations in Oregon than with those in central California, marine spatial planning must occur at a multi-state scale to reach marine conservation goals.
Book Synopsis Historical and Oceanographic Influences on Phylogeography in the California Current Ecosystem and Applications to Management of Marine Species by : Alison Jane Haupt
Download or read book Historical and Oceanographic Influences on Phylogeography in the California Current Ecosystem and Applications to Management of Marine Species written by Alison Jane Haupt and published by Stanford University. This book was released on 2011 with total page 138 pages. Available in PDF, EPUB and Kindle. Book excerpt: The overarching theme of my thesis is to explore patterns of larval dispersal as they relate to management of fished marine species. I employed a case study of two species: Megastraea undosa and Parastichopus parvimensis to investigate patterns of phylogeography and assess relative scales of dispersal for these two species which are fished in both California, USA and Baja California, MEX. To examine how some generalities for many species can be made for a specific geographic area, I reviewed all existing phylogeographic studies around Cape Mendocino, CA. Dispersal at a snail's pace: Strong genetic structure in the fisheries gastropod Megastaea undosa. Information about larval dispersal is necessary for effective management of fisheries. Population genetics are often employed to assess dispersal, but these data also carry artifacts from the evolutionary history of a species. I assessed historical and modern demography of the wavy top snail, Megastraea undosa, a marine snail that is fished in California, USA and Baja California, Mexico. Genetic structure at the COI mtDNA locus is strikingly high, with large shifts in haplotype frequencies between southern Baja and southern California. Coalescent-based modeling of genetic data suggests that the population has limited dispersal throughout the range and underwent a northward range expansion after the last glacial maximum. I conclude that both historical and contemporary processes affect observed patterns of phylogeography in M. undosa. Consideration of the evolutionary history of target species allows for a more accurate interpretation of genetic data for management. iv Subtle genetic structure in the commercially fished warty sea cucumber, Parastichopus parvimensis. The warty sea cucumber, P. parvimensis, is fished commercially in both California, USA and Baja California, Mexico but little is known about the status of the fisheries or if separate stocks exist. P. parvimensis has a long pelagic larval duration of 50-90 days, which may translate to high connectivity throughout the species range (Monterey, CA, USA to Bahía Asuncion, BCS, Mexico). I examined phylogeographic patterns at the COI mtDNA locus and five microsatellite loci throughout the range of P. parvimensis and was particularly interested in patterns associated with the potential phylogeographic barriers of Point Conception, CA, USA and Punta Eugenia, BCS, MEX. I found no structure associated with Point Conception, but subtle genetic structure at both types of loci for Punta Eugenia, which may be mechanistically explained by oceanographic patterns. These data have important implications for management of the sea cucumber fishery and indicate that populations south of Punta Eugenia likely do not receive biologically meaningful input of larvae from northern populations to supplement the local fishery. Concordant phylogeographic patterns associated with the major headland of Cape Mendocino in northern California. Most coastlines are non-linear and headlands such as Cape Mendocino may interact with oceanographic processes to create barriers to dispersal. Though Cape Mendocino is a prominent headland, it has been largely ignored in the phylogeographic literature, which focuses instead on Point Conception in southern California. I reviewed and synthesized phylogeographic studies that include sampling sites north and south of Cape Mendocino and discuss the v oceanography and topography of the cape as potential mechanistic drivers of larval dispersal patterns. Slightly more than half (24 out of 46) of the surveyed species that showed significant genetic structure around this headland, which suggests that this headland may be an important barrier to dispersal and may limit connectivity between northern and central California. If populations north of Cape Mendocino have higher connectivity with populations in Oregon than with those in central California, marine spatial planning must occur at a multi-state scale to reach marine conservation goals.
Mankind has evolved both genetically and culturally to become a most successful and dominant species. But we are now so numerous and our technology is so p- erful that we are having major effects on the planet, its environment, and the b- sphere. For some years prophets have warned of the possible detrimental consequences of our activities, such as pollution, deforestation, and overfishing, and recently it has become clear that we are even changing the atmosphere (e. g. ozone, carbon dioxide). This is worrying since the planet’s life systems are involved and dependent on its functioning. Current climate change – global w arming – is one recognised consequence of this larger problem. To face this major challenge, we will need the research and advice of many disciplines – Physics, Chemistry, Earth Sciences, Biology, and Sociology – and particularly the commitment of wise politicians such as US Senator Al Gore. An important aspect of this global problem that has been researched for several decades is the loss of species and the impoverishment of our ecosystems, and hence their ability to sustain themselves, and more particularly us! Through evolutionary time new species have been generated and some have gone extinct. Such extinction and regeneration are moulded by changes in the earth’s crust, atmosphere, and resultant climate. Some extinctions have been massive, particularly those asso- ated with catastrophic meteoric impacts like the end of the Cretaceous Period 65Mya.
Book Synopsis Relict Species by : Jan Christian Habel
Download or read book Relict Species written by Jan Christian Habel and published by Springer Science & Business Media. This book was released on 2009-12-03 with total page 451 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mankind has evolved both genetically and culturally to become a most successful and dominant species. But we are now so numerous and our technology is so p- erful that we are having major effects on the planet, its environment, and the b- sphere. For some years prophets have warned of the possible detrimental consequences of our activities, such as pollution, deforestation, and overfishing, and recently it has become clear that we are even changing the atmosphere (e. g. ozone, carbon dioxide). This is worrying since the planet’s life systems are involved and dependent on its functioning. Current climate change – global w arming – is one recognised consequence of this larger problem. To face this major challenge, we will need the research and advice of many disciplines – Physics, Chemistry, Earth Sciences, Biology, and Sociology – and particularly the commitment of wise politicians such as US Senator Al Gore. An important aspect of this global problem that has been researched for several decades is the loss of species and the impoverishment of our ecosystems, and hence their ability to sustain themselves, and more particularly us! Through evolutionary time new species have been generated and some have gone extinct. Such extinction and regeneration are moulded by changes in the earth’s crust, atmosphere, and resultant climate. Some extinctions have been massive, particularly those asso- ated with catastrophic meteoric impacts like the end of the Cretaceous Period 65Mya.
Birds catch the public imagination like no other group of animals; in addition, birders are perhaps the largest non-professional naturalist community. Genomics and associated bioinformatics have revolutionised daily life in just a few decades. At the same time, this development has facilitated the application of genomics technology to ecological and evolutionary studies, including biodiversity and conservation at all levels. This book reveals how the exciting toolbox of genomics offers new opportunities in all areas of avian biology. It presents contributions from prominent experts at the intersection of avian biology and genomics, and offers an ideal introduction to the world of genomics for students, biologists and bird enthusiasts alike. The book begins with a historical perspective on how genomic technology was adopted by bird ecology and evolution research groups. This led, as the book explains, to a revised understanding of avian evolution, with exciting consequences for biodiversity research as a whole. Lastly, these impacts are illustrated using seminal examples and the latest discoveries from avian biology laboratories around the world.
Book Synopsis Avian Genomics in Ecology and Evolution by : Robert H. S. Kraus
Download or read book Avian Genomics in Ecology and Evolution written by Robert H. S. Kraus and published by Springer. This book was released on 2019-06-29 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: Birds catch the public imagination like no other group of animals; in addition, birders are perhaps the largest non-professional naturalist community. Genomics and associated bioinformatics have revolutionised daily life in just a few decades. At the same time, this development has facilitated the application of genomics technology to ecological and evolutionary studies, including biodiversity and conservation at all levels. This book reveals how the exciting toolbox of genomics offers new opportunities in all areas of avian biology. It presents contributions from prominent experts at the intersection of avian biology and genomics, and offers an ideal introduction to the world of genomics for students, biologists and bird enthusiasts alike. The book begins with a historical perspective on how genomic technology was adopted by bird ecology and evolution research groups. This led, as the book explains, to a revised understanding of avian evolution, with exciting consequences for biodiversity research as a whole. Lastly, these impacts are illustrated using seminal examples and the latest discoveries from avian biology laboratories around the world.
