The Computing Dendrite

The Computing Dendrite

Author: Hermann Cuntz

Publisher: Springer Science & Business Media

Published: 2013-11-23

Total Pages: 519

ISBN-13: 1461480949

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Neuronal dendritic trees are complex structures that endow the cell with powerful computing capabilities and allow for high neural interconnectivity. Studying the function of dendritic structures has a long tradition in theoretical neuroscience, starting with the pioneering work by Wilfrid Rall in the 1950s. Recent advances in experimental techniques allow us to study dendrites with a new perspective and in greater detail. The goal of this volume is to provide a résumé of the state-of-the-art in experimental, computational, and mathematical investigations into the functions of dendrites in a variety of neural systems. The book first looks at morphological properties of dendrites and summarizes the approaches to measure dendrite morphology quantitatively and to actually generate synthetic dendrite morphologies in computer models. This morphological characterization ranges from the study of fractal principles to describe dendrite topologies, to the consequences of optimization principles for dendrite shape. Individual approaches are collected to study the aspects of dendrite shape that relate directly to underlying circuit constraints and computation. The second main theme focuses on how dendrites contribute to the computations that neurons perform. What role do dendritic morphology and the distributions of synapses and membrane properties over the dendritic tree have in determining the output of a neuron in response to its input? A wide range of studies is brought together, with topics ranging from general to system-specific phenomena—some having a strong experimental component, and others being fully theoretical. The studies come from many different neural systems and animal species ranging from invertebrates to mammals. With this broad focus, an overview is given of the diversity of mechanisms that dendrites can employ to shape neural computations.


Book Synopsis The Computing Dendrite by : Hermann Cuntz

Download or read book The Computing Dendrite written by Hermann Cuntz and published by Springer Science & Business Media. This book was released on 2013-11-23 with total page 519 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neuronal dendritic trees are complex structures that endow the cell with powerful computing capabilities and allow for high neural interconnectivity. Studying the function of dendritic structures has a long tradition in theoretical neuroscience, starting with the pioneering work by Wilfrid Rall in the 1950s. Recent advances in experimental techniques allow us to study dendrites with a new perspective and in greater detail. The goal of this volume is to provide a résumé of the state-of-the-art in experimental, computational, and mathematical investigations into the functions of dendrites in a variety of neural systems. The book first looks at morphological properties of dendrites and summarizes the approaches to measure dendrite morphology quantitatively and to actually generate synthetic dendrite morphologies in computer models. This morphological characterization ranges from the study of fractal principles to describe dendrite topologies, to the consequences of optimization principles for dendrite shape. Individual approaches are collected to study the aspects of dendrite shape that relate directly to underlying circuit constraints and computation. The second main theme focuses on how dendrites contribute to the computations that neurons perform. What role do dendritic morphology and the distributions of synapses and membrane properties over the dendritic tree have in determining the output of a neuron in response to its input? A wide range of studies is brought together, with topics ranging from general to system-specific phenomena—some having a strong experimental component, and others being fully theoretical. The studies come from many different neural systems and animal species ranging from invertebrates to mammals. With this broad focus, an overview is given of the diversity of mechanisms that dendrites can employ to shape neural computations.

Dendrites

Dendrites

Author: Greg Stuart

Publisher: Oxford University Press

Published: 2017-04-13

Total Pages: 616

ISBN-13: 0191062472

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Dendrites are complex neuronal structures that receive and integrate synaptic input from other nerve cells. They therefore play a critical role in brain function. Although dendrites were discovered over a century ago, due to the development of powerful new techniques there has been a dramatic resurgence of interest in the properties and function of these beautiful structures. This is the third edition of the first book devoted exclusively to dendrites. It contains a comprehensive survey of the current state of dendritic research across a wide range of topics, from dendritic morphology, evolution, development, and plasticity through to the electrical, biochemical and computational properties of dendrites, and finally to the key role of dendrites in brain disease. The third edition has been thoroughly revised, with the addition of a number of new chapters and comprehensive updates or rewrites of existing chapters by leading experts. "Dendrites" will be of interest to researchers and students in neuroscience and related fields, as well as to anyone interested in how the brain works.


Book Synopsis Dendrites by : Greg Stuart

Download or read book Dendrites written by Greg Stuart and published by Oxford University Press. This book was released on 2017-04-13 with total page 616 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dendrites are complex neuronal structures that receive and integrate synaptic input from other nerve cells. They therefore play a critical role in brain function. Although dendrites were discovered over a century ago, due to the development of powerful new techniques there has been a dramatic resurgence of interest in the properties and function of these beautiful structures. This is the third edition of the first book devoted exclusively to dendrites. It contains a comprehensive survey of the current state of dendritic research across a wide range of topics, from dendritic morphology, evolution, development, and plasticity through to the electrical, biochemical and computational properties of dendrites, and finally to the key role of dendrites in brain disease. The third edition has been thoroughly revised, with the addition of a number of new chapters and comprehensive updates or rewrites of existing chapters by leading experts. "Dendrites" will be of interest to researchers and students in neuroscience and related fields, as well as to anyone interested in how the brain works.

Dendrites

Dendrites

Author: Greg Stuart

Publisher: Oxford University Press, USA

Published: 2007

Total Pages: 578

ISBN-13: 0198566565

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Dendrites form the major receiving part of neurons. This text presents a survey of knowledge on dendrites, from their morphology and development, through to their electrical chemical, and computational properties.


Book Synopsis Dendrites by : Greg Stuart

Download or read book Dendrites written by Greg Stuart and published by Oxford University Press, USA. This book was released on 2007 with total page 578 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dendrites form the major receiving part of neurons. This text presents a survey of knowledge on dendrites, from their morphology and development, through to their electrical chemical, and computational properties.

Physics Of Dendrites: Computational Experiments

Physics Of Dendrites: Computational Experiments

Author: Peter K Galenko

Publisher: World Scientific

Published: 1995-01-16

Total Pages: 211

ISBN-13: 9814501247

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This volume presents the growth of macrostructures in first-order nonequilibrium phase transitions in physical, chemical and biological multicomponent systems. Nonequilibrium thermodynamics and modern problems of crystallization synergetics are discussed. An introduction to computer physics of dendrites is also given. Wonderful variety in growth structures appears to be the consequence of different nonequilibrium alloy crystallization conditions and concerns problems of crystallization synergetics. This book has computer simulation results of the origin and development of the observed variety of primary macroscopic growth structures — cells, dendrites and grains should be regarded as one of the fundamental problems of alloy crystallization. Special attention is paid to the physical nature of phenomena of dendrite formation in alloys.


Book Synopsis Physics Of Dendrites: Computational Experiments by : Peter K Galenko

Download or read book Physics Of Dendrites: Computational Experiments written by Peter K Galenko and published by World Scientific. This book was released on 1995-01-16 with total page 211 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume presents the growth of macrostructures in first-order nonequilibrium phase transitions in physical, chemical and biological multicomponent systems. Nonequilibrium thermodynamics and modern problems of crystallization synergetics are discussed. An introduction to computer physics of dendrites is also given. Wonderful variety in growth structures appears to be the consequence of different nonequilibrium alloy crystallization conditions and concerns problems of crystallization synergetics. This book has computer simulation results of the origin and development of the observed variety of primary macroscopic growth structures — cells, dendrites and grains should be regarded as one of the fundamental problems of alloy crystallization. Special attention is paid to the physical nature of phenomena of dendrite formation in alloys.

Advances in Soft Computing

Advances in Soft Computing

Author: Ildar Batyrshin

Publisher: Springer

Published: 2019-01-02

Total Pages: 454

ISBN-13: 3030044912

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The two-volume set LNAI 11288 and 11289 constitutes the proceedings of the 17th Mexican International Conference on Artificial Intelligence, MICAI 2018, held in Guadalajara, Mexico, in October 2018. The total of 62 papers presented in these two volumes was carefully reviewed and selected from 149 submissions. The contributions are organized in topical as follows: Part I: evolutionary and nature-inspired intelligence; machine learning; fuzzy logic and uncertainty management. Part II: knowledge representation, reasoning, and optimization; natural language processing; and robotics and computer vision.


Book Synopsis Advances in Soft Computing by : Ildar Batyrshin

Download or read book Advances in Soft Computing written by Ildar Batyrshin and published by Springer. This book was released on 2019-01-02 with total page 454 pages. Available in PDF, EPUB and Kindle. Book excerpt: The two-volume set LNAI 11288 and 11289 constitutes the proceedings of the 17th Mexican International Conference on Artificial Intelligence, MICAI 2018, held in Guadalajara, Mexico, in October 2018. The total of 62 papers presented in these two volumes was carefully reviewed and selected from 149 submissions. The contributions are organized in topical as follows: Part I: evolutionary and nature-inspired intelligence; machine learning; fuzzy logic and uncertainty management. Part II: knowledge representation, reasoning, and optimization; natural language processing; and robotics and computer vision.

Computer Techniques in Neuroanatomy

Computer Techniques in Neuroanatomy

Author: J.J. Capowski

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 497

ISBN-13: 1468456911

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This book is the story of the marriage of a new techl}ology, computers, with an old problem, the study of neuroanatomical structures using the light microscope. It is aimed toward you, the neuroanatomist, who until now have used computers primarily for word processing but now wish to use them also to collect and analyze your laboratory data. Mter reading the book, you will be better equipped to use a computer system for data collection and analysis, to employ a programmer who might develop a system for you, or to evaluate the systems available in the marketplace. To start toward this goal, a glossary first presents commonly used terms in computer assisted neuroanatomy. This, on its own, will aid you as it merges the jargon of the two different fields. Then, Chapter 1 presents a historical review to describe the manual tasks involved in presenting and measuring anatomic structures. This review lays a base line of the tasks that were done before computers and the amount of skill and time needed to perform the tasks. In Chapters 2 and 3, you will find basic information about laboratory computers and programs to the depth required for you to use the machines easily and talk with some fluency to computer engineers, programmers, and salesmen. Chapters 4, 5, and 6 present the use of computers to reconstruct anatomic structures, i.e., to enter them into a computer memory, where they are later displayed and analyzed.


Book Synopsis Computer Techniques in Neuroanatomy by : J.J. Capowski

Download or read book Computer Techniques in Neuroanatomy written by J.J. Capowski and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 497 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is the story of the marriage of a new techl}ology, computers, with an old problem, the study of neuroanatomical structures using the light microscope. It is aimed toward you, the neuroanatomist, who until now have used computers primarily for word processing but now wish to use them also to collect and analyze your laboratory data. Mter reading the book, you will be better equipped to use a computer system for data collection and analysis, to employ a programmer who might develop a system for you, or to evaluate the systems available in the marketplace. To start toward this goal, a glossary first presents commonly used terms in computer assisted neuroanatomy. This, on its own, will aid you as it merges the jargon of the two different fields. Then, Chapter 1 presents a historical review to describe the manual tasks involved in presenting and measuring anatomic structures. This review lays a base line of the tasks that were done before computers and the amount of skill and time needed to perform the tasks. In Chapters 2 and 3, you will find basic information about laboratory computers and programs to the depth required for you to use the machines easily and talk with some fluency to computer engineers, programmers, and salesmen. Chapters 4, 5, and 6 present the use of computers to reconstruct anatomic structures, i.e., to enter them into a computer memory, where they are later displayed and analyzed.

The Spike

The Spike

Author: Mark Humphries

Publisher: Princeton University Press

Published: 2021-03-09

Total Pages: 232

ISBN-13: 0691213518

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The story of a neural impulse and what it reveals about how our brains work We see the last cookie in the box and think, can I take that? We reach a hand out. In the 2.1 seconds that this impulse travels through our brain, billions of neurons communicate with one another, sending blips of voltage through our sensory and motor regions. Neuroscientists call these blips “spikes.” Spikes enable us to do everything: talk, eat, run, see, plan, and decide. In The Spike, Mark Humphries takes readers on the epic journey of a spike through a single, brief reaction. In vivid language, Humphries tells the story of what happens in our brain, what we know about spikes, and what we still have left to understand about them. Drawing on decades of research in neuroscience, Humphries explores how spikes are born, how they are transmitted, and how they lead us to action. He dives into previously unanswered mysteries: Why are most neurons silent? What causes neurons to fire spikes spontaneously, without input from other neurons or the outside world? Why do most spikes fail to reach any destination? Humphries presents a new vision of the brain, one where fundamental computations are carried out by spontaneous spikes that predict what will happen in the world, helping us to perceive, decide, and react quickly enough for our survival. Traversing neuroscience’s expansive terrain, The Spike follows a single electrical response to illuminate how our extraordinary brains work.


Book Synopsis The Spike by : Mark Humphries

Download or read book The Spike written by Mark Humphries and published by Princeton University Press. This book was released on 2021-03-09 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt: The story of a neural impulse and what it reveals about how our brains work We see the last cookie in the box and think, can I take that? We reach a hand out. In the 2.1 seconds that this impulse travels through our brain, billions of neurons communicate with one another, sending blips of voltage through our sensory and motor regions. Neuroscientists call these blips “spikes.” Spikes enable us to do everything: talk, eat, run, see, plan, and decide. In The Spike, Mark Humphries takes readers on the epic journey of a spike through a single, brief reaction. In vivid language, Humphries tells the story of what happens in our brain, what we know about spikes, and what we still have left to understand about them. Drawing on decades of research in neuroscience, Humphries explores how spikes are born, how they are transmitted, and how they lead us to action. He dives into previously unanswered mysteries: Why are most neurons silent? What causes neurons to fire spikes spontaneously, without input from other neurons or the outside world? Why do most spikes fail to reach any destination? Humphries presents a new vision of the brain, one where fundamental computations are carried out by spontaneous spikes that predict what will happen in the world, helping us to perceive, decide, and react quickly enough for our survival. Traversing neuroscience’s expansive terrain, The Spike follows a single electrical response to illuminate how our extraordinary brains work.

Computers and Computations in the Neurosciences

Computers and Computations in the Neurosciences

Author: P. Michael Conn

Publisher: Academic Press

Published: 2013-10-22

Total Pages: 609

ISBN-13: 148325951X

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Methods in Neurosciences, Volume 10: Computers and Computations in the Neurosciences discusses the use of computers in the neurosciences. The book deals with data collection, analysis, and modeling, with emphasis on the use of computers. Section I involves data collection using a personal microcomputer system. One paper presents a tutorial on using a PC-based motor control composed of an electronic circuit to adjust the motion of a light microscope stage through a software program. Other papers discuss computer methods in nuclei cartography and a computer-assisted quantitative receptor autoradiography in studying receptor density distribution. Section II deals with data analysis and some computer programs for kinetic modeling of gene expression in neurons. The book also discusses a computerized analysis of opioid receptor heterogeneity by ligand binding in test animals using computerized programs instead of employing manual or graphical methods. Computerized curve-fitting allows the researcher to utilize a more precise mathematical model to describe the binding of one ligand to one class of sites. Section III evaluates data modeling and simulations and describes the practicality of using computers to design model ion channels. Another paper discusses a graphical interaction program called MEMPOT to simulate an electrophysiological investigation of the properties of the membrane potential in stimulated cells. The book also presents a quantitative data gathered from computer simulation of the factors that affect neuronal density per measured sections. The book is suitable for microbiologists, biochemists, neuroscientists, and researchers in the field of medical research, as well as for advanced computer programmers in medical research work.


Book Synopsis Computers and Computations in the Neurosciences by : P. Michael Conn

Download or read book Computers and Computations in the Neurosciences written by P. Michael Conn and published by Academic Press. This book was released on 2013-10-22 with total page 609 pages. Available in PDF, EPUB and Kindle. Book excerpt: Methods in Neurosciences, Volume 10: Computers and Computations in the Neurosciences discusses the use of computers in the neurosciences. The book deals with data collection, analysis, and modeling, with emphasis on the use of computers. Section I involves data collection using a personal microcomputer system. One paper presents a tutorial on using a PC-based motor control composed of an electronic circuit to adjust the motion of a light microscope stage through a software program. Other papers discuss computer methods in nuclei cartography and a computer-assisted quantitative receptor autoradiography in studying receptor density distribution. Section II deals with data analysis and some computer programs for kinetic modeling of gene expression in neurons. The book also discusses a computerized analysis of opioid receptor heterogeneity by ligand binding in test animals using computerized programs instead of employing manual or graphical methods. Computerized curve-fitting allows the researcher to utilize a more precise mathematical model to describe the binding of one ligand to one class of sites. Section III evaluates data modeling and simulations and describes the practicality of using computers to design model ion channels. Another paper discusses a graphical interaction program called MEMPOT to simulate an electrophysiological investigation of the properties of the membrane potential in stimulated cells. The book also presents a quantitative data gathered from computer simulation of the factors that affect neuronal density per measured sections. The book is suitable for microbiologists, biochemists, neuroscientists, and researchers in the field of medical research, as well as for advanced computer programmers in medical research work.

Biophysics of Computation

Biophysics of Computation

Author: Christof Koch

Publisher: Oxford University Press

Published: 2004-10-28

Total Pages: 587

ISBN-13: 0195181999

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Neural network research often builds on the fiction that neurons are simple linear threshold units, completely neglecting the highly dynamic and complex nature of synapses, dendrites, and voltage-dependent ionic currents. Biophysics of Computation: Information Processing in Single Neurons challenges this notion, using richly detailed experimental and theoretical findings from cellular biophysics to explain the repertoire of computational functions available to single neurons. The author shows how individual nerve cells can multiply, integrate, or delay synaptic inputs and how information can be encoded in the voltage across the membrane, in the intracellular calcium concentration, or in the timing of individual spikes.Key topics covered include the linear cable equation; cable theory as applied to passive dendritic trees and dendritic spines; chemical and electrical synapses and how to treat them from a computational point of view; nonlinear interactions of synaptic input in passive and active dendritic trees; the Hodgkin-Huxley model of action potential generation and propagation; phase space analysis; linking stochastic ionic channels to membrane-dependent currents; calcium and potassium currents and their role in information processing; the role of diffusion, buffering and binding of calcium, and other messenger systems in information processing and storage; short- and long-term models of synaptic plasticity; simplified models of single cells; stochastic aspects of neuronal firing; the nature of the neuronal code; and unconventional models of sub-cellular computation.Biophysics of Computation: Information Processing in Single Neurons serves as an ideal text for advanced undergraduate and graduate courses in cellular biophysics, computational neuroscience, and neural networks, and will appeal to students and professionals in neuroscience, electrical and computer engineering, and physics.


Book Synopsis Biophysics of Computation by : Christof Koch

Download or read book Biophysics of Computation written by Christof Koch and published by Oxford University Press. This book was released on 2004-10-28 with total page 587 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neural network research often builds on the fiction that neurons are simple linear threshold units, completely neglecting the highly dynamic and complex nature of synapses, dendrites, and voltage-dependent ionic currents. Biophysics of Computation: Information Processing in Single Neurons challenges this notion, using richly detailed experimental and theoretical findings from cellular biophysics to explain the repertoire of computational functions available to single neurons. The author shows how individual nerve cells can multiply, integrate, or delay synaptic inputs and how information can be encoded in the voltage across the membrane, in the intracellular calcium concentration, or in the timing of individual spikes.Key topics covered include the linear cable equation; cable theory as applied to passive dendritic trees and dendritic spines; chemical and electrical synapses and how to treat them from a computational point of view; nonlinear interactions of synaptic input in passive and active dendritic trees; the Hodgkin-Huxley model of action potential generation and propagation; phase space analysis; linking stochastic ionic channels to membrane-dependent currents; calcium and potassium currents and their role in information processing; the role of diffusion, buffering and binding of calcium, and other messenger systems in information processing and storage; short- and long-term models of synaptic plasticity; simplified models of single cells; stochastic aspects of neuronal firing; the nature of the neuronal code; and unconventional models of sub-cellular computation.Biophysics of Computation: Information Processing in Single Neurons serves as an ideal text for advanced undergraduate and graduate courses in cellular biophysics, computational neuroscience, and neural networks, and will appeal to students and professionals in neuroscience, electrical and computer engineering, and physics.

Computer Analysis of Neuronal Structures

Computer Analysis of Neuronal Structures

Author: Robert Lindsay

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 224

ISBN-13: 146840766X

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It seems particularly appropriate that this pioneering collection of papers should be dedicated to Donald Sholl since those of us who count, measure, and reconstruct elements of the neural en~emble are all very much in his debt. Sholl was certainly not the first to attempt quantification of certain aspects of brain structure. No computers were available to him for the kind of answers he sought, and some of his answers - or rather his interpretations - may not stand the test of time. But we remember him because of the questions he asked and for the reasons he asked them. At a time when the entire family of Golgi techniques was in almost total eclipse, he had the judgment to rely on them. And in a period when the canonical neuron was a perfect sphere (the enormous dendritic superstructure being almost forgotten), he was one of a very few who looked to dendrite extension and pattern as a prime clue to the overall problem of neuronal connectivity.


Book Synopsis Computer Analysis of Neuronal Structures by : Robert Lindsay

Download or read book Computer Analysis of Neuronal Structures written by Robert Lindsay and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt: It seems particularly appropriate that this pioneering collection of papers should be dedicated to Donald Sholl since those of us who count, measure, and reconstruct elements of the neural en~emble are all very much in his debt. Sholl was certainly not the first to attempt quantification of certain aspects of brain structure. No computers were available to him for the kind of answers he sought, and some of his answers - or rather his interpretations - may not stand the test of time. But we remember him because of the questions he asked and for the reasons he asked them. At a time when the entire family of Golgi techniques was in almost total eclipse, he had the judgment to rely on them. And in a period when the canonical neuron was a perfect sphere (the enormous dendritic superstructure being almost forgotten), he was one of a very few who looked to dendrite extension and pattern as a prime clue to the overall problem of neuronal connectivity.