The Tomato Genome

The Tomato Genome

Author: Mathilde Causse

Publisher: Springer

Published: 2016-11-21

Total Pages: 260

ISBN-13: 3662533898

DOWNLOAD EBOOK

This book describes the strategy used for sequencing, assembling and annotating the tomato genome and presents the main characteristics of this sequence with a special focus on repeated sequences and the ancestral polyploidy events. It also includes the chloroplast and mitochondrial genomes. Tomato (Solanum lycopersicum) is a major crop plant as well as a model for fruit development, and the availability of the genome sequence has completely changed the paradigm of the species’ genetics and genomics. The book describes the numerous genetic and genomic resources available, the identified genes and quantitative trait locus (QTL) identified, as well as the strong synteny across Solanaceae species. Lastly, it discusses the consequences of the availability of a high-quality genome sequence of the cultivated species for the research community. It is a valuable resource for students and researchers interested in the genetics and genomics of tomato and Solanaceae.


Book Synopsis The Tomato Genome by : Mathilde Causse

Download or read book The Tomato Genome written by Mathilde Causse and published by Springer. This book was released on 2016-11-21 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the strategy used for sequencing, assembling and annotating the tomato genome and presents the main characteristics of this sequence with a special focus on repeated sequences and the ancestral polyploidy events. It also includes the chloroplast and mitochondrial genomes. Tomato (Solanum lycopersicum) is a major crop plant as well as a model for fruit development, and the availability of the genome sequence has completely changed the paradigm of the species’ genetics and genomics. The book describes the numerous genetic and genomic resources available, the identified genes and quantitative trait locus (QTL) identified, as well as the strong synteny across Solanaceae species. Lastly, it discusses the consequences of the availability of a high-quality genome sequence of the cultivated species for the research community. It is a valuable resource for students and researchers interested in the genetics and genomics of tomato and Solanaceae.

Genetics, Genomics, and Breeding of Tomato

Genetics, Genomics, and Breeding of Tomato

Author: Barbara E. Liedl

Publisher: CRC Press

Published: 2013-01-17

Total Pages: 522

ISBN-13: 1578088046

DOWNLOAD EBOOK

This volume covers the advances in the study of tomato diversity and taxonomy. It examines the mapping of simple and complex traits, classical genetics and breeding, association studies, molecular breeding, positional cloning, and structural and comparative genomics. The contributors also discuss transcriptomics, proteomics, metabolomics, and bioinformatics. The information in this book will be useful to researchers working on other Solanaceaous crops as well as those interested in using the tomato as a model crop species.


Book Synopsis Genetics, Genomics, and Breeding of Tomato by : Barbara E. Liedl

Download or read book Genetics, Genomics, and Breeding of Tomato written by Barbara E. Liedl and published by CRC Press. This book was released on 2013-01-17 with total page 522 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers the advances in the study of tomato diversity and taxonomy. It examines the mapping of simple and complex traits, classical genetics and breeding, association studies, molecular breeding, positional cloning, and structural and comparative genomics. The contributors also discuss transcriptomics, proteomics, metabolomics, and bioinformatics. The information in this book will be useful to researchers working on other Solanaceaous crops as well as those interested in using the tomato as a model crop species.

Genes, Enzymes, and Populations

Genes, Enzymes, and Populations

Author: Adrian Srb

Publisher: Springer

Published: 2012-06-14

Total Pages: 0

ISBN-13: 9781468428827

DOWNLOAD EBOOK

The present volume includes the large majority of papers given at the symposium entitled "Fundamental Approaches to Plant and Animal Improvement," held at Cali, Colombia, in November, 1972. The primary focal points were on various genetic mechanisms, including gene action and mutation, the development of phenotypic attributes, and on evolution, including that controlled by man for agricultural purposes. In fact, very little referring in any particular way to animal improvement was included, while a great deal of attention was paid to higher plants and to microorganisms. On the other hand, both the population genetics of insects and insect control were considered. Thus Genes, Enzymes, and Populations, the title given to this published work, seems to me to represent somewhat more fairly the contents than does the original symposium title. Given the intent of the symposium, which is expressed in the original title, the published record cannot be expected to be a neatly packaged presentation of some highly defined subject matter. Indeed the diverse subjects represent some, but by no means all, of the varied and dynamic scientific activities that need to be components in the improvement and production of agriculturally Significant plants at a time when world populations are rapidly increasing and shortages of food occurring. In any case, the organizers of the symposium wisely decided that considerations of environment as well as of genetics should be introduced into the thinking of the group and that physiology and molecular biology could not be ignored.


Book Synopsis Genes, Enzymes, and Populations by : Adrian Srb

Download or read book Genes, Enzymes, and Populations written by Adrian Srb and published by Springer. This book was released on 2012-06-14 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The present volume includes the large majority of papers given at the symposium entitled "Fundamental Approaches to Plant and Animal Improvement," held at Cali, Colombia, in November, 1972. The primary focal points were on various genetic mechanisms, including gene action and mutation, the development of phenotypic attributes, and on evolution, including that controlled by man for agricultural purposes. In fact, very little referring in any particular way to animal improvement was included, while a great deal of attention was paid to higher plants and to microorganisms. On the other hand, both the population genetics of insects and insect control were considered. Thus Genes, Enzymes, and Populations, the title given to this published work, seems to me to represent somewhat more fairly the contents than does the original symposium title. Given the intent of the symposium, which is expressed in the original title, the published record cannot be expected to be a neatly packaged presentation of some highly defined subject matter. Indeed the diverse subjects represent some, but by no means all, of the varied and dynamic scientific activities that need to be components in the improvement and production of agriculturally Significant plants at a time when world populations are rapidly increasing and shortages of food occurring. In any case, the organizers of the symposium wisely decided that considerations of environment as well as of genetics should be introduced into the thinking of the group and that physiology and molecular biology could not be ignored.

The Wild Solanums Genomes

The Wild Solanums Genomes

Author: Domenico Carputo

Publisher: Springer Nature

Published: 2021-09-21

Total Pages: 250

ISBN-13: 3030303438

DOWNLOAD EBOOK

This book gathers the latest information on the organization of genomes in wild Solanum species and emphasizes how this information is yielding direct outcomes in the fields of molecular breeding, as well as a better understanding of both the patterns and processes of evolution. Cultivated Solanums, such as potato, tomato, and pepper, possess a high number of wild relatives that are of great importance for practical breeding and evolutionary studies. Their germplasm is often characterized by allelic diversity, as well as genes that are lacking in the cultivated species. Wild Solanums have not been fully exploited by breeders. This is mainly due to the lack of information regarding their genetics and genomics. However, the genome of important cultivated Solanaceae such as potato, tomato, eggplant, and pepper has already been sequenced. On the heels of these recent developments, wild Solanum genomes are now becoming available, opening an exciting new era for both basic research and varietal development in the Solanaceae.


Book Synopsis The Wild Solanums Genomes by : Domenico Carputo

Download or read book The Wild Solanums Genomes written by Domenico Carputo and published by Springer Nature. This book was released on 2021-09-21 with total page 250 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gathers the latest information on the organization of genomes in wild Solanum species and emphasizes how this information is yielding direct outcomes in the fields of molecular breeding, as well as a better understanding of both the patterns and processes of evolution. Cultivated Solanums, such as potato, tomato, and pepper, possess a high number of wild relatives that are of great importance for practical breeding and evolutionary studies. Their germplasm is often characterized by allelic diversity, as well as genes that are lacking in the cultivated species. Wild Solanums have not been fully exploited by breeders. This is mainly due to the lack of information regarding their genetics and genomics. However, the genome of important cultivated Solanaceae such as potato, tomato, eggplant, and pepper has already been sequenced. On the heels of these recent developments, wild Solanum genomes are now becoming available, opening an exciting new era for both basic research and varietal development in the Solanaceae.

Site-specific Recombination of the Tomato Genome

Site-specific Recombination of the Tomato Genome

Author: Jeroen Stuurman

Publisher:

Published: 1997

Total Pages: 89

ISBN-13:

DOWNLOAD EBOOK


Book Synopsis Site-specific Recombination of the Tomato Genome by : Jeroen Stuurman

Download or read book Site-specific Recombination of the Tomato Genome written by Jeroen Stuurman and published by . This book was released on 1997 with total page 89 pages. Available in PDF, EPUB and Kindle. Book excerpt:

PlantOmics: The Omics of Plant Science

PlantOmics: The Omics of Plant Science

Author: Debmalya Barh

Publisher: Springer

Published: 2015-03-18

Total Pages: 839

ISBN-13: 8132221729

DOWNLOAD EBOOK

PlantOmics: The Omics of Plant Science provides a comprehensive account of the latest trends and developments of omics technologies or approaches and their applications in plant science. Thirty chapters written by 90 experts from 15 countries are included in this state-of-the-art book. Each chapter describes one topic/omics such as: omics in model plants, spectroscopy for plants, next generation sequencing, functional genomics, cyto-metagenomics, epigenomics, miRNAomics, proteomics, metabolomics, glycomics, lipidomics, secretomics, phenomics, cytomics, physiomics, signalomics, thiolomics, organelle omics, micro morphomics, microbiomics, cryobionomics, nanotechnology, pharmacogenomics, and computational systems biology for plants. It provides up to date information, technologies, and their applications that can be adopted and applied easily for deeper understanding plant biology and therefore will be helpful in developing the strategy for generating cost-effective superior plants for various purposes. In the last chapter, the editors have proposed several new areas in plant omics that may be explored in order to develop an integrated meta-omics strategy to ensure the world and earth’s health and related issues. This book will be a valuable resource to students and researchers in the field of cutting-edge plant omics.


Book Synopsis PlantOmics: The Omics of Plant Science by : Debmalya Barh

Download or read book PlantOmics: The Omics of Plant Science written by Debmalya Barh and published by Springer. This book was released on 2015-03-18 with total page 839 pages. Available in PDF, EPUB and Kindle. Book excerpt: PlantOmics: The Omics of Plant Science provides a comprehensive account of the latest trends and developments of omics technologies or approaches and their applications in plant science. Thirty chapters written by 90 experts from 15 countries are included in this state-of-the-art book. Each chapter describes one topic/omics such as: omics in model plants, spectroscopy for plants, next generation sequencing, functional genomics, cyto-metagenomics, epigenomics, miRNAomics, proteomics, metabolomics, glycomics, lipidomics, secretomics, phenomics, cytomics, physiomics, signalomics, thiolomics, organelle omics, micro morphomics, microbiomics, cryobionomics, nanotechnology, pharmacogenomics, and computational systems biology for plants. It provides up to date information, technologies, and their applications that can be adopted and applied easily for deeper understanding plant biology and therefore will be helpful in developing the strategy for generating cost-effective superior plants for various purposes. In the last chapter, the editors have proposed several new areas in plant omics that may be explored in order to develop an integrated meta-omics strategy to ensure the world and earth’s health and related issues. This book will be a valuable resource to students and researchers in the field of cutting-edge plant omics.

Taxonomy of Wild Tomatoes and Their Relatives (Solanum Sect. Lycopersicoides, Sect. Juglandifolia, Sect. Lycopersicon; Solanaceae)

Taxonomy of Wild Tomatoes and Their Relatives (Solanum Sect. Lycopersicoides, Sect. Juglandifolia, Sect. Lycopersicon; Solanaceae)

Author: Iris E. Peralta

Publisher:

Published: 2008

Total Pages: 208

ISBN-13:

DOWNLOAD EBOOK


Book Synopsis Taxonomy of Wild Tomatoes and Their Relatives (Solanum Sect. Lycopersicoides, Sect. Juglandifolia, Sect. Lycopersicon; Solanaceae) by : Iris E. Peralta

Download or read book Taxonomy of Wild Tomatoes and Their Relatives (Solanum Sect. Lycopersicoides, Sect. Juglandifolia, Sect. Lycopersicon; Solanaceae) written by Iris E. Peralta and published by . This book was released on 2008 with total page 208 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Genetic Diversity in Plants

Genetic Diversity in Plants

Author: Amir Muhammed

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 493

ISBN-13: 1468428861

DOWNLOAD EBOOK

For the last eighteen years we have been deeply involved in a cooperative effort with our Latin American colleagues in genetics, biochemistry, physiology, and molecular biology. We have been in close contact with scientists in a number of centers and have helped to organize symposia, workshops, and so forth, in an effort to accelerate their development and make their substantial work known. These symposia in Latin America have been quite successful. The fifteenth will take place in Brasilia in 1977. At the request of colleagues, we are in the process of developing a similar series in Asia. The first very successful symposium was held in Calcutta in 1973. We were most pleased when Dr. Amir Muhammed, Vice Chancellor of the University of Agriculture, Lyallpur suggested that we hold a symposium on a topic of great importance to Pakistan, Genetic Control of Diversity in Plants, under the auspices of the University of Agriculture. It is our hope that this symposium will be followed by additional ones in Pakistan as well as in other countries in the Far East. Leadership is quickly developing in the hands of outstanding scientists in these countries, and we appreciate the opportunity to cooperate with them. We are especially grateful to the Natiohal Science Foundation for makingPL- 480 funds available which made this symposium possible.


Book Synopsis Genetic Diversity in Plants by : Amir Muhammed

Download or read book Genetic Diversity in Plants written by Amir Muhammed and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 493 pages. Available in PDF, EPUB and Kindle. Book excerpt: For the last eighteen years we have been deeply involved in a cooperative effort with our Latin American colleagues in genetics, biochemistry, physiology, and molecular biology. We have been in close contact with scientists in a number of centers and have helped to organize symposia, workshops, and so forth, in an effort to accelerate their development and make their substantial work known. These symposia in Latin America have been quite successful. The fifteenth will take place in Brasilia in 1977. At the request of colleagues, we are in the process of developing a similar series in Asia. The first very successful symposium was held in Calcutta in 1973. We were most pleased when Dr. Amir Muhammed, Vice Chancellor of the University of Agriculture, Lyallpur suggested that we hold a symposium on a topic of great importance to Pakistan, Genetic Control of Diversity in Plants, under the auspices of the University of Agriculture. It is our hope that this symposium will be followed by additional ones in Pakistan as well as in other countries in the Far East. Leadership is quickly developing in the hands of outstanding scientists in these countries, and we appreciate the opportunity to cooperate with them. We are especially grateful to the Natiohal Science Foundation for makingPL- 480 funds available which made this symposium possible.

Analysis of Ac/Ds Activation Tagged Mutants in Tomato (solanum Lycopersicum)

Analysis of Ac/Ds Activation Tagged Mutants in Tomato (solanum Lycopersicum)

Author: Ipeleng Randome

Publisher:

Published: 2015

Total Pages: 136

ISBN-13: 9781339286235

DOWNLOAD EBOOK

Tomato (Solanum lycopersicum) is a crop of immense economic and nutritional importance worldwide and also a good model organism for genomic studies of other dicot species. The recent completion of the tomato genome sequence is a great milestone towards learning about the tomato genome. Elucidation of the function of the different genes using different functional genomic tools is therefore important in adding to this resource. To this end, we have developed an Ac-Ds transposon 'activation tagging' (ATag) system to be able to transpose transposon inserts, bearing a strong 35S-enhancer element, all around the genome. An Ac-Ds ATag construct was used to generate transformants in the tomato cultivar M82 that has an erect determinate habit, suitable for greenhouse and field screening. The progeny of putative tomato transformants were germinated and grown to maturity in the greenhouse. Plants with obvious mutant phenotypes were identified, which included dwarfism, altered leaf morphology and necrotic spots on leaves. Presence of the ATag transformed construct was confirmed in the plants by genomic PCR using primers specific to different parts of the Ac/Ds cassette. Activity of the transposon system was also tested by excision PCR using primers flanking the Ds insert in the construct. Insertion sites of the Ds ATag were determined using TAIL-PCR for the progeny plants, and the tagged genes in two mutants were identified by alignment of the flanking sites to the tomato genome. With the availability of the tomato genome sequence, the mutants described will be a good resource for the identification of genes for plant development and tomato breeding.


Book Synopsis Analysis of Ac/Ds Activation Tagged Mutants in Tomato (solanum Lycopersicum) by : Ipeleng Randome

Download or read book Analysis of Ac/Ds Activation Tagged Mutants in Tomato (solanum Lycopersicum) written by Ipeleng Randome and published by . This book was released on 2015 with total page 136 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tomato (Solanum lycopersicum) is a crop of immense economic and nutritional importance worldwide and also a good model organism for genomic studies of other dicot species. The recent completion of the tomato genome sequence is a great milestone towards learning about the tomato genome. Elucidation of the function of the different genes using different functional genomic tools is therefore important in adding to this resource. To this end, we have developed an Ac-Ds transposon 'activation tagging' (ATag) system to be able to transpose transposon inserts, bearing a strong 35S-enhancer element, all around the genome. An Ac-Ds ATag construct was used to generate transformants in the tomato cultivar M82 that has an erect determinate habit, suitable for greenhouse and field screening. The progeny of putative tomato transformants were germinated and grown to maturity in the greenhouse. Plants with obvious mutant phenotypes were identified, which included dwarfism, altered leaf morphology and necrotic spots on leaves. Presence of the ATag transformed construct was confirmed in the plants by genomic PCR using primers specific to different parts of the Ac/Ds cassette. Activity of the transposon system was also tested by excision PCR using primers flanking the Ds insert in the construct. Insertion sites of the Ds ATag were determined using TAIL-PCR for the progeny plants, and the tagged genes in two mutants were identified by alignment of the flanking sites to the tomato genome. With the availability of the tomato genome sequence, the mutants described will be a good resource for the identification of genes for plant development and tomato breeding.

Tomato Diseases

Tomato Diseases

Author: Dominique Blancard

Publisher: CRC Press

Published: 2012-08-15

Total Pages: 689

ISBN-13: 1840766360

DOWNLOAD EBOOK

Following the successful first edition, this revised and greatly expanded edition Tomato Diseases: Identification, Biology and Control is the definitive work on the diseases and disorders of the tomato. The tomato is the world's most widely produced vegetable. The number of diseases affecting the tomato is enormous: hundreds of bio-aggressors, more


Book Synopsis Tomato Diseases by : Dominique Blancard

Download or read book Tomato Diseases written by Dominique Blancard and published by CRC Press. This book was released on 2012-08-15 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: Following the successful first edition, this revised and greatly expanded edition Tomato Diseases: Identification, Biology and Control is the definitive work on the diseases and disorders of the tomato. The tomato is the world's most widely produced vegetable. The number of diseases affecting the tomato is enormous: hundreds of bio-aggressors, more